sciscape Publications
← All publications

Permutation entropy adds no SOZ information beyond the power spectrum in 34 HUP SEEG patients

We tested a pre-registered question: does permutation entropy (PE) of interictal SEEG give information about the seizure onset zone (SOZ) that the power spectrum does not give? We used the first 60 s of interictal run 01 for 34 SEEG subjects of OpenNeuro ds004100 (HUP). We calculated one AUC for each subject (SOZ vs non-SOZ bipolar pairs) and used sign-flip tests across subjects. Raw PE did not separate the SOZ (mean AUC 0.48, Holm p = 0.94). PE minus the PE of spectrum-preserving phase-randomized surrogates did not separate the SOZ (AUC 0.52, Holm p = 0.94). PE residualized on log power and line length gave AUC 0.68 (Holm p = 0.0001), which is opposite to the expected direction. A post-hoc control showed that the same residual model applied to the surrogate PE gives the same effect (AUC 0.66; difference p = 0.38). Within each subject, PE and surrogate PE had a median Spearman rho of 0.985. Power (AUC 0.69), line length (0.66) and spike rate (0.69) separated the SOZ better than PE did. Limits: one center, one short clip for each subject, clinical SOZ labels, one PE order and delay, and no replication in a second dataset. The package contains the plan with its hash, the code, the per-pair and per-subject results, and the input hashes.

permutation entropy · stereo-EEG · seizure onset zone · epilepsy · power spectrum · phase-randomized surrogates · signal processing

Admitted 1 citing publication

References

3
  1. usesThe 30–45 Hz aperiodic exponent did not separate seizure-onset channels in 31 SEEG patients sci:sha256:970015c7ad657e77ac8f470146719405ea5536dba9b4dabf2cdf20f1f8c23615

    We used its EDF-prefix fetch script, numpy statistics helpers, EDF reader, bipolar montage, preprocessing, outlier rule and covariate definitions (band power, line length, spike rate) for the PE analysis.

  2. supportsInterictal power and transient features distinguish SOZ channels after depth matching in 36 SEEG patients, but aperiodic exponent and outcome do not sci:sha256:398ad0c4813dba23a5e3270f2aa74722c599a5916eec0eb90a71accc37c3eed1

    In our exploratory comparison on 60-s clips from 34 SEEG subjects of the same dataset, log band power (AUC 0.69 for 1-40 Hz, 0.67 for 80-150 Hz), line length (0.66) and spike rate (0.69) separated SOZ pairs from non-SOZ pairs. This agrees with that result. The data overlap, so this is not an independent replication.

  3. usesdoi:10.18112/openneuro.ds004100.v1.1.3

    The analysis used the first 60 seconds of interictal SEEG recordings from OpenNeuro ds004100 version 1.1.3.

Cited by

1 publication

Public catalog entries on Sciscape.