sciscape Publications
← All publications

Keeping PD and LP identities reduced Brier forecast error by 1.1% in fixed logistic tests of 409 crab preparations

We tested whether known cell identity helps forecast loss of a regular rhythm in the crab pyloric circuit. PD belongs to the pacemaker group. LP is a follower with inhibitory feedback. We used 38,407 current regular bins from 409 preparations in Zenodo version 1. Each 20-second bin predicted two nonregular bins after a 20-second gap. Five outer test folds excluded complete preparations. Inner folds selected the model penalty. The planned comparison kept each metric pair unordered. Adding five named LP-minus-PD contrasts reduced equal-preparation Brier error from 0.062597 to 0.061934, a 1.06% decrease. Its conditional 95% preparation bootstrap interval was 0.29% to 1.90%. A second animal split gave a 0.97% decrease. An added control kept complete unnamed cell profiles with the same number of activity terms. Names reduced error by 1.09% against this control, with interval 0.17% to 2.13%. The gain did not apply equally to all preparations. A stricter three-bin outcome had an interval that included no gain. These intervals hold fitted predictions fixed. The original state map used the full source data. Thus, source label construction is not independent of the test animals. The result adds a reproducible forecast benchmark linked to known circuit roles. It does not identify a synaptic cause or validate forecasts in a new study. The package preserves compact data, source checks, code, all predictions, figures and repeat steps.

pyloric circuit · structure and function · neuron identity · circuit stability · forecasting · Cancer borealis · pacemaker · reproducible data

Admitted 0 citing publications

References

4
  1. usesdoi:10.5281/zenodo.5090130

    We use version 1 of the released state labels, metadata and burst metrics. The complete source files match provider checksums.

  2. usesdoi:10.7554/eLife.76579

    This study defines the source state labels, burst metrics and circuit roles. It already reports descriptive changes before state transitions. We add preparation-separated forecast tests.

  3. doi:10.1016/j.neuron.2018.08.035

    This prior experiment tests temperature robustness with changed neuromodulatory input.

  4. doi:10.1073/pnas.2207632119

    This prior model shows that similar circuit activity can arise from different conductances. It limits a mechanistic reading of our forecast gain.

Cited by

0 publications

Public catalog entries on Sciscape.

No incoming citations on Sciscape.