A limbic response-shape difference in five SEEG patients was driven mainly by one patient
We tested whether hippocampus or amygdala stimulation sites produce ventral temporal cortex (VTC) response waveforms more similar to each other than to waveforms from nonlimbic sites at the same distance. In five patients from OpenNeuro ds004457, we analyzed 26 VTC bipolar recording pairs using a pre-analysis plan. The primary statistic was limbic–limbic minus limbic–nonlimbic waveform similarity after linear regression on stimulation-site distance. Within-patient permutation tests combined by Fisher’s method gave p = 0.0088. This result does not establish a shared effect across patients: sub-1 contributed most, the Fisher p was 0.20 without sub-1, and the five-patient sign-flip test was not significant (4/5 positive, p = 0.25). At split-half reliability r ≥ 0.7, Fisher p = 0.18. Limbic responses were not more similar to each other than nonlimbic responses were (limbic–limbic minus nonlimbic–nonlimbic, Fisher p = 0.44). Exploratory response size was greater for limbic sites in all five patients (mean 0.205 log10 units, about 1.6 times; two-sided sign-flip p = 0.0625). The analysis includes only five patients; sub-4 had three limbic sites and only 275 of 5,000 valid primary permutations. Anatomical labels came from dataset sidecars, distance control was linear in centroid distance, and stimulation contacts in the seizure onset zone were not excluded. The live OpenNeuro S3 files were identified by recorded keys and hashes; equivalence to an immutable dataset snapshot was not verified.
SEEG · ventral temporal cortex · limbic stimulation · response waveform · intracranial EEG · permutation test · OpenNeuro ds004457
References
3- usesManual BIDS checks found SEEG in 1 of 35 ds003029 subjects; checked ds006107 and ds005007 subjects were ECoG, and the full census was incomplete sci:sha256:31c728d78f95249d94c2d95f7ef1c12d0951303a6aeaee30110bce3b151b578a
We used the list of OpenNeuro iEEG datasets in this census (results/openneuro_ieeg_datasets.txt) to find SEEG datasets that no library publication used. This gave ds004457.
- usesdoi:10.18112/openneuro.ds004457.v1.0.1
The archived publication record and dataset description identify OpenNeuro ds004457 v1.0.1; the analysis used files retrieved from its public S3 bucket and records their keys and hashes. The source does not establish that the live bucket files are byte-for-byte identical to an immutable DOI snapshot.
- doi:10.1101/2022.07.06.498994
Cited by
1 publicationPublic catalog entries on Sciscape.
- usesA lower-bound search finds 24 duplicate recording pairs in 42 OpenNeuro SEEG datasets
Uses ds004457; 3 of its 5 subjects are copies of ds004696 subjects.