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Across 5 SEEG centers, a 10-feature model trained at other centers ranked clinical SOZ pairs better than HFA

Many studies show that 1 interictal feature ranks seizure-onset-zone (SOZ) SEEG pairs above chance. A clinical tool must also work at a new center. We tested whether a 10-feature model, fitted only on patients from other centers, ranks SOZ pairs better than high-frequency activity (HFA, 80–150 Hz) alone. We used archived per-pair tables, with no new signal processing, for 60 patients from 5 centers (HUP 31, NIH 11, PY 8, rns 9, umf 1; 5,820 pairs, 559 SOZ). Features were z-scored within each patient. We used L2 logistic regression with leave-one-center-out (LOCO) fitting, per-patient rank AUC, a sign-flip test, a patient bootstrap, and Holm correction. The plan was hashed before analysis. Mean LOCO AUC was 0.755 and HFA AUC was 0.665 (difference +0.090, 95% CI 0.041–0.141, Holm p=0.0008; higher in 43 of 60 patients). LOCO was better than HFA at all 5 centers. Leave-one-patient-out fitting, which also used the same center, gave no measurable gain (+0.004, p=0.20). Pooled z-scores instead of within-patient z-scores reduced AUC by 0.035 (p=0.0017). Spike rate and 1–40 Hz power had the largest stable weights. A post hoc test found the model also outperformed the best single feature, 1–40 Hz power (+0.058, p=0.0015). Limits: clinical labels without surgical outcome; 120-s clips; 4 of 5 centers came from one dataset, all features came from one pipeline, and umf had 1 patient.

SEEG · seizure-onset zone · interictal · epilepsy · leave-one-center-out · logistic regression · rank AUC · high-frequency activity · spike rate

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References

6
  1. supportsFeature agreement marked top interictal HFA pairs with SOZ hits in 117 patients, while fusion did not significantly improve top-1 hits sci:sha256:e5668b147f882c59ae7de05e8c30cc56eee6083d4d7239bfd34ccd09d8f59b59

    Their result that feature agreement adds to HFA agrees with our result: a multi-feature model and a mean-rank fusion ranked SOZ pairs better than HFA alone, also across centers.

  2. usesThe 30–45 Hz aperiodic exponent did not separate seizure-onset channels in 31 SEEG patients sci:sha256:970015c7ad657e77ac8f470146719405ea5536dba9b4dabf2cdf20f1f8c23615

    Computed the HUP ds004100 per-pair interictal features used as model inputs.

  3. usesAcross 3 SEEG cohorts, HFA increased with SOZ-contact count, but one-contact pair rankings differed by cohort sci:sha256:20f3a93f9a1119caf5857842a98d8c563f5d1e4a65296d84a7c44ae8c1cf2e29

    Source package of the 2 per-pair feature tables, copied unchanged with SHA-256 check.

  4. usesAcross 29 SEEG patients, the 30–45 Hz exponent did not separate SOZ channels, while four other features did sci:sha256:115bc8cb0b4c9e536b5f083843a2745508d3c6635a8156b661a9e084f51582a7

    Computed the ds003876 per-pair interictal features (NIH, PY, rns, umf) with the same code.

  5. usesdoi:10.18112/openneuro.ds004100.v1.1.3

    The HUP archived per-pair feature table is identified as derived from OpenNeuro ds004100.

  6. usesdoi:10.18112/openneuro.ds003876.v1.0.2

    The NIH, PY, rns, and umf archived per-pair feature table is identified as derived from OpenNeuro ds003876.

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