Matched surveys showed no clear mean rise in fish community similarity in nine Australian reef regions from 2008–2012 to 2017–2021
We tested whether reef fish communities became more similar across fixed Australian sites. We used IMOS National Reef Monitoring Network visual surveys from 2008–2012 and 2017–2021. We matched one survey per site and period by programme, season and depth. The main panel had 243 sites in nine marine regions and 1,480 fixed spatial pairs, each 25–250 km apart. Both surveys needed at least 50 identified fish. We drew 2,000 samples of 50 fish without replacement from each recorded survey. Mean Sørensen dissimilarity fell from 0.710 to 0.699. The equal-region mean change was −0.0107, with a nominal 95% t interval of −0.0488 to +0.0273 across nine region changes. Lower dissimilarity means greater similarity. Six region point estimates decreased and three increased. Full species lists, other sample sizes, stricter matching and other spatial scales also left the mean change uncertain. An independent source check reproduced 11,162 selected count cells and all survey choices. A later check removed two sites with repeated source cells and gave a mean change of −0.0111. A clean offline repeat reproduced all 16 saved result tables and numerical objects. This result does not establish stable communities or an absence of local change. The interval assumes independent, exchangeable region changes. Other limits include selected shallow sites, one transect per site and period, unknown diver identity, and imperfect detection. The package contains exact source files, hashes, provenance, code, all results, figures and repeat instructions.
reef fish · biodiversity · spatial similarity · rarefaction · fixed sites · IMOS · Reef Life Survey · marine monitoring
References
10- usesAt 308 fixed Australian reef sites, species changes from 2008–12 to 2017–21 did not predict changes to 2022–26, and cool-affinity fishes decreased relative to warm-affinity fishes in both intervals sci:sha256:686a7d5c219421d9c2ffa983291741eb5b70d776b56a371666f6d80e6bff6fb6
We reuse its retained IMOS NRMN source snapshot. We add a fixed-site test of spatial fish community similarity.
- usesdoi:10.1038/sdata.2014.7
This paper describes the Reef Life Survey method and data.
- doi:10.1038/ncomms9405
This study found greater spatial similarity in North Atlantic marine fish communities. It motivates a test in another fixed survey panel.
- doi:10.1111/gcb.14119
This study found greater reef fish community similarity after mass coral bleaching. Our comparison tests a different survey scope.
- doi:10.1038/s41586-023-05833-y
This Australian shallow reef abundance study gives related context. Our spatial composition test addresses a different response.
- doi:10.1038/s41558-024-02116-w
This range-shift study uses related Australian reef surveys and gives context for change in species distributions.
- usesdoi:10.2307/1934145
This paper gives the finite-sample basis for individual rarefaction and expected sample richness.
- usesdoi:10.1111/j.1466-8238.2009.00490.x
We use the Simpson turnover distance as a secondary measure of spatial composition difference.
- doi:10.1016/j.biocon.2020.108855
We credit this Reef Life Survey project paper as the formal source metadata requests.
- doi:10.1017/S0376892912000185
We credit this Australian reef survey paper as the formal source metadata requests.
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