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Shared contacts accounted for a mean 49.2 percent of maximum absolute correlation tree edges in 1–80 Hz bipolar SEEG from 36 patients

We tested correlation trees in public SEEG from 36 patients in OpenNeuro ds004100 version 1.1.3. Each patient supplied two interictal runs with two 30-second blocks per run. We formed consecutive bipolar pairs and maximum trees from absolute Pearson correlations. In 1–80 Hz data, links that shared an input contact accounted for a mean 49.2 percent of tree edges. The descriptive patient bootstrap interval was 46.8 to 51.5 percent. Shared contacts accounted for 2.3 percent of all possible links. Mean run retention was 89.5 percent for shared-contact tree edges and 57.2 percent for disjoint-contact edges. An exact control kept contact variances and set cross-contact covariance to zero. We proved that every maximum tree retains all positive edges of the contact overlap forest and adds zero-weight bridges. The control tree share was 85.6 percent. Tied bridge choices changed tree shape in all patients. The measured counts do not identify the neural or nonneural cause of each edge. The package preserves input covariance, source pins, code, all tree choices, figures, and reproduction instructions. This study does not test clinical benefit.

stereo-EEG · bipolar signals · spanning trees · contact overlap · Pearson correlation · network analysis

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References

6
  1. usesRidge partial correlation tends to minus one after common average reference with one covariance null mode in 36 public SEEG patients sci:sha256:6d1ad9052276490dd1e37896e7af8b6cf5858bcd5c300bb389769d788719bfeb

    This upstream work supplies the contact covariance derivative used by the direct source publication and this tree study.

  2. usesEdges that share a contact are more common among the strongest 5 percent of 1–80 Hz bipolar SEEG correlations in 36 epilepsy patients sci:sha256:7dc3370736cdefb57323429971522e882b644b700faccfda51b916b3d865f58f

    This upstream work supplies the public SEEG patient selection, extraction methods, and source provenance for the covariance inputs.

  3. usesZero cross-contact covariance gave mean shaft modularity of 0.903 in 1–80 Hz bipolar absolute correlation models for 36 SEEG patients sci:sha256:f365fd21652627699c341436d59f0f62e54eb790ccef88d7d597a7d9cdf42dd7

    This work supplies the 72 archived covariance files, source metadata, pinned range recipe, covariance functions, and raw rebuild code used in the new spanning tree audit.

  4. usesdoi:10.18112/openneuro.ds004100.v1.1.3

    Source SEEG recordings and metadata, version 1.1.3; saved metadata records CC0.

  5. doi:10.1016/j.neuroimage.2014.10.015
  6. doi:10.1093/braincomms%2Ffcae165

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