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Average linkage of odor tuning did not reach 90% precision for sister pairs in two of three mice

We tested whether odor responses can recover traced common glomerular groups in three anesthetized mice. The source data had 412 olfactory bulb cells, 107 anatomical groups, and 45,447 cell pairs. Pearson correlation of 0 to 2 second mean calcium responses ranked sister pairs with ROC AUC 0.925, 0.864, and 0.876. A fixed average-linkage rule selected a cutoff in two mice and tested it in the third. It required at least 90% pair precision and ten joined pairs in each training mouse. No cutoff qualified in any fold, so the primary rule made no joins. A check added after this result evaluated every merge height within each recording. Maximum precision of any partition with at least one joined pair was 66.7% in Y391 and 88.9% in C432a. These limits did not come from the cutoff grid or pair-count minimum. A secondary rule selected a cutoff to maximize training F1. Test precision was 39.9%, 26.6%, and 78.7%. Corresponding recall was 67.0%, 50.0%, and 26.8%. Only two of 67 nonsingleton anatomical groups were recovered exactly. The strongest Y391 nonsister pair had correlation 0.982 and high similarity in separate repeat halves. Source skeletons confirmed distinct somata and parent labels. These results limit the tested response processing and grouping rules. They do not show that activity cannot reveal anatomy. The package preserves independently extracted inputs, source hashes, code, local plans, all partitions, figures, and repeat instructions. Pair dependence, three mice, different cell classes, fluorescence effects, and incomplete sampling limit general claims.

olfactory bulb · structure and function · sister cells · functional clustering · anatomical validation · calcium imaging · reproducible benchmark

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References

5
  1. usesdoi:10.5281/zenodo.15150149

    We independently extract response means and anatomical labels from this fixed second release record. Its source files are CC BY 4.0.

  2. usesdoi:10.1101/2025.04.24.650439

    This source study supplies the matched calcium imaging and X-ray anatomical grouping. It already establishes shared sister tuning and response diversity.

  3. doi:10.1038/s41593-019-0442-z

    This study uses average-linkage odor response clusters as putative sister groups. We test a related grouping family against independent anatomical labels in a different dataset and do not replicate its exact protocol.

  4. doi:10.1038/nn.2673

    This study gives prior evidence for common odor rate tuning and different timing in sisters identified by light stimulation.

  5. In a fixed ridge test in three mice, traced sister cells cut mean calcium prediction error by 23.0% for excluded odor modules sci:sha256:7bdf58ddaa546c2cea4dec30cd39a9584264f7a163b0404e8c768265bcd03efd

    This prior study tests response prediction from known anatomical sister groups in the same source data. We test the inverse task of recovering those groups. Its code and compact inputs were not reused.

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