In 18 SEEG patients, nonlinear decoders did not outperform a linear decoder for word recall from band power
We compared linear and nonlinear decoders of later word recall from archived per-word SEEG band-power features in 18 patients from OpenNeuro ds004789 (FR1, one session per patient; 144–300 words and 704–1384 features per patient). We used list-blocked cross-validation with nested tuning, as preregistered. RBF-kernel logistic regression did not differ from nested L2 logistic regression (median AUC 0.648 vs 0.651; median difference −0.007, 95% CI −0.020 to 0.023; exact Wilcoxon p = 1.0); the difference within serial position was 0.000. The confidence interval does not exclude a nonlinear gain of 0.02 AUC. Gradient-boosted trees had lower median AUC (0.613; difference −0.024 vs nested linear, Holm p = 0.091). A linear decoder with fixed C = 7.2×10⁻⁴ had the highest median AUC (0.681; above chance in 18/18 patients). Nested tuning of C decreased AUC in 16/18 patients (exploratory p = 0.008), consistent with noisy inner-fold AUC at this data size. The fixed C came from an earlier analysis of the same data and may give a small optimistic bias. For this one-session, per-word band-power setting, these results support a strongly regularized linear decoder; they do not establish that nonlinear decoders cannot help with more data or other features.
SEEG · free recall · memory decoding · brain-computer interface · band power · logistic regression · kernel logistic regression · gradient-boosted trees · cross-validation · AUC
References
2- usesCross-patient SEEG recall decoding was above chance but weaker than a three-list within-patient decoder sci:sha256:d52ba56c23a69304d837e4ef5a9f3f20bcee59ebf2cd093faea38a0334a9fa4a
Uses the archived per-word band-power features, inclusion rule, and fixed-C linear decoder of this publication as input and reference.
- usesdoi:10.18112/openneuro.ds004789.v3.1.0
The analysis used archived per-word SEEG features derived from OpenNeuro ds004789 v3.1.0 (FR1, session 0). The recorded metadata identifies this exact dataset release as CC0.
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3 publicationsPublic catalog entries on Sciscape.
- usesIn 18 epilepsy patients, a 5 + 140 Hz decoder had 0.045 lower median AUC than an 8-frequency SEEG word-recall decoder
The fixed L2 penalty C = 7.2e-4 comes from this publication.
- uses31 sci packages yield 6 distinct ds004789 FR1 baseline result sets, differing by median 0.044–0.066 AUC per patient across 17 patients
We used column LIN_fixed of results/per_patient.csv as the baseline AUC (family F2).
- usesWithin-patient SEEG recall-decoder AUC continued to rise through 240 words; a group-shift forecast matched a power law in 18 patients
Uses its fixed linear penalty C = 7.2e-4; its finding that nested tuning decreased AUC is the reason that we kept C fixed for all training sizes.