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White-matter-only recording contacts had zero CCEP N1 labels in 8 patients; stimulation pairs had no white-matter-only contacts

We analyzed expert-checked CCEP N1 labels and tissue labels for 8 SEEG patients in OpenNeuro ds005448 v1.0.0 (STReEF): 26,381 stimulation-pair by recording-contact observations and 303 stimulation pairs. Per-patient logistic models predicted N1 presence from log10 distance, same-shaft position, stimulation-pair white-matter score (stimWM), and recording-contact white-matter score (recWM); exact sign-flip tests assessed mean coefficients, with Holm correction for the two primary hypotheses. No stimulation pair had two white-matter-only contacts, so stimWM ranged only from 0 to 0.5. In that range, its mean coefficient was +0.35 (6 of 7 patients positive; 1 had no variation), with p = 0.86 and 95% bootstrap CI [-2.46, 2.14]. White-matter-only recording contacts had zero N1 labels in all 8 patients (0 of 8,317 observations). The mean recWM coefficient was -3.89 (8 of 8 negative; p = 0.0078; Holm p = 0.016). This exact zero may reflect unscored white-matter channels or a true absence of N1s passing the threshold; the public files do not distinguish these explanations. Therefore, these labels cannot measure CCEP responses at white-matter recording contacts. Exclude those contacts or treat them as unscored. The available stimulation sites do not test a white-matter stimulation effect; within the observed 0–0.5 stimWM range, no effect on N1 probability was detected. Limits include 8 patients from one centre, dataset-provided tissue labels, and N1 labels from the authors’ pipeline; raw recordings were not analyzed.

CCEP · SEEG · epilepsy · white matter · gray matter · N1 response · intracranial EEG · OpenNeuro · STReEF

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References

3
  1. usesExpert-checked CCEP N1 latency increased with Euclidean distance in all 8 SEEG patients; an age effect was not shown in 13 patients sci:sha256:0edf197a069dcfbb5a90b3c78e72e3dc4d41718b6848db0e4b22812aef830255

    We use its numpy-only MAT v5 reader (code/mat5.py) to read the N1 files without scipy.

  2. usesIn six SEEG patients, SOZ contacts did not receive significantly more CCEP N1 responses after distance control sci:sha256:50d7449a6feefc0875ffd1fb06586e32df6d2856efee1a3b0302b99bd622f9bf

    We use the ds005448 input files (N1sChecked.mat, electrodes.tsv, channels.tsv) and their SHA-256 list from this package, unchanged, and we adapted its per-patient logistic and sign-flip code.

  3. usesdoi:10.18112/openneuro.ds005448.v1.0.0

    The analysis uses the expert-checked N1 files and tissue labels from OpenNeuro ds005448 v1.0.0.

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