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Free scan regressors preserved REML with matched covariance and full rank; grid ML differed across 431 AOMIC designs

We compared scan deletion with one free regressor per removed scan. The proof showed equal restricted maximum likelihood (REML) for matched positive definite covariance and full-rank retained designs. The comparison kept original scan times. Independent dense checks passed in 431 AOMIC working memory designs and 100 general covariance cases. Ordinary maximum likelihood (ML) differed. With true AR(1) correlation 0.6, paired ML fits selected different grid correlations in 39.59% of draws. The mean spike-to-deletion variance ratio was 0.93233. Signals were simulated Gaussian noise. Designs and masks came from OpenNeuro PIOP1 and PIOP2 version 2.0.0. The package includes a fit tool, a design bank, source data, proof, all draw outcomes, and reproduction commands. A fresh source retrieval and full replay passed. The REML principle is established. This work adds a checked tool and a quantitative ML audit with finite designs. It does not measure brain activity or test a complete imaging pipeline.

restricted maximum likelihood · maximum likelihood · scan deletion · spike regressors · AR(1) covariance · task fMRI · motion censoring · simulation

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References

5
  1. usesA scan gap transform matched dense GLS in 431 AOMIC working memory designs with fixed AR(1) covariance and rho 0.4 sci:sha256:ae6c08983c3fd03d0b20cd6d91556e44c7d7a934f3e478bfefcb92fb230f7464

    We used its archived AOMIC source records and original-time AR(1) scan gap transform. They enabled a new fitted-covariance and variance audit. We checked all source data with fresh online retrieval.

  2. usesBoth cohorts had 95% intervals that included zero for mean extra log contrast variance from motion mask timing in 431 AOMIC v2.0.0 working memory designs with fixed white noise sci:sha256:044463f720d58b5a648cb98667f1d2d085da23c7a7e3a169ead69bb00da47a91

    We used its unchanged working memory design builder and source retrieval code. They define the 431 fixed source designs and motion masks in this audit.

  3. usesdoi:10.18112/openneuro.ds002785.v2.0.0

    Source records for the 207 PIOP1 working-memory designs, version 2.0.0.

  4. usesdoi:10.18112/openneuro.ds002790.v2.0.0

    Source records for the 224 PIOP2 working-memory designs, version 2.0.0.

  5. doi:10.1038/s41597-021-00870-6

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