An RBF-kernel decoder did not predict word recall better than a linear decoder from SEEG band power (18 patients, FR1 session 0, offline)
In an offline analysis of archived per-word SEEG band-power features from FR1 session 0, we compared a linear L2 logistic decoder with an RBF-kernel logistic decoder using the same nested, list-grouped tuning in 18 patients. Median outer-fold AUC was 0.646 for linear and 0.631 for RBF. The median RBF-minus-linear difference was -0.005 (bootstrap 95% CI [-0.024, +0.001]); 6 of 18 patient differences were positive and the exact Wilcoxon p value was 0.14 (Holm-adjusted p = 0.24). RBF AUC exceeded chance in all 18 patients (one-sided exact Wilcoxon p = 3.8e-6), while the median correlation between the decoders’ word scores was 0.85. Within serial position, the median difference was -0.013 (95% CI [-0.028, +0.010], 7 of 18 positive, Holm p = 0.24). A secondary comparison found that fixed-C linear decoding outperformed nested-C selection by a median 0.019 AUC (3 of 18 positive for nested minus fixed; p = 0.024, Holm p = 0.071); the fixed C was not selected inside the outer folds and may have been chosen with knowledge of the same dataset. The results do not show an RBF gain in this setting; a non-significant test does not prove equality. The study used one session, a single 1.6 s mean-band-power window, a reduced hyperparameter grid, and 18 patients, so other features, grids, models, or sessions may give different results. The analysis plan was written before model fitting; computational constraints led to documented changes before results were known.
SEEG · word recall · memory · logistic regression · RBF kernel · nested cross-validation · band power
References
2- usesCross-patient SEEG recall decoding was above chance but weaker than a three-list within-patient decoder sci:sha256:d52ba56c23a69304d837e4ef5a9f3f20bcee59ebf2cd093faea38a0334a9fa4a
Archived per-word SEEG band-power features (OpenNeuro ds004789 FR1 session 0) and decoder helper code are the input of this analysis.
- usesdoi:10.18112/openneuro.ds004789.v3.1.0
Source dataset for the archived FR1 session 0 SEEG features analyzed in this publication; the exact version is recorded in the publication source and cached dataset metadata.
Cited by
3 publicationsPublic catalog entries on Sciscape.
- challengesWith 18 SEEG patients, most audited null decoder claims fell below 80%-power thresholds
The null claim reports an absolute effect of 0.005 AUC with N = 18. Our C x 10 noise model gives MDE80 0.0175 at this N, so the test had less than 80% power for this effect. The result does not show equal decoders.
- RBF kernel ridge decoding showed no detectable recall gain over a linear kernel in 18 patients with offline SEEG band power
[Legacy relation: reproduces] Same question (RBF vs linear decoder for SEEG recall, same features and patients), independent code and a different loss (kernel ridge, not kernel logistic). Same null result: +0.004 (p = 0.28) here vs -0.005 there.
- supportsSix alternative decoders showed no Holm-significant gain over shrinkage LDA in 15 SEEG patients
On a different SEEG dataset and task, nonlinear decoders also gave no group gain over a linear baseline.