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Fixed weights retained 80 percent efficiency in both states of 107 of 108 selected Allen models with independent noise

We tested one fixed positive readout across first and late 50 Hz response summaries in Allen cortical slice data. Each stored median was assigned as a model mean. Input noise was independent. A second-order cone method chose weights to maximize the smaller efficiency across states. Efficiency was squared signal-to-noise ratio divided by its state-specific optimum. Fixed weights retained at least 80 percent in both states in 107 of 108 selected input groups. First-state optimal weights fell below 80 percent in the late state in 18 groups. Median fixed-weight worst-state efficiency was 98.7 percent for mouse excitation, 98.6 percent for mouse inhibition and 95.4 percent for human excitation. A second optimizer agreed within 3.3e-8 efficiency units. Noise subtraction left only 25 groups, with three below 80 percent. Median-to-mean error, unknown covariance, separate input trials, different summary endpoints and selected slices prevent a neuronal decoding claim. Original code, aggregate evidence, hashes and a figure support reproduction. External records stay outside the bundle.

Allen Institute · synaptic convergence · fixed readout · short-term plasticity · signal-to-noise ratio · conditional model

Admitted 1 citing publication

References

9
  1. usesdoi:10.1126/science.abj5861
  2. useshttps://allen-synphys.s3-us-west-2.amazonaws.com/synphys_r2.1_small.sqlite
  3. useshttps://raw.githubusercontent.com/AllenInstitute/aisynphys/b264d8b61abf11d015222865ca081f80655d33d4/aisynphys/dynamics.py
  4. usesIndependent noise did not make input sums more reliable in 55 of 130 selected Allen median-response models sci:sha256:2592773cb55908dee7cf99bc6159a27f90347ad466e7086dc6f5176240212a14

    Uses its first-state input grouping and model-mean convention. New code tests fixed weights across two states.

  5. reviewsA correlation cap of 0.5 gave zero input weights in 79 of 130 selected Allen slice readout models sci:sha256:dc35fd2644866531c5edf8966d55b3fc64c10938219127903a16e049d280d1e4

    Prior covariance-cap model in one response state; the present model tests state transfer under independence.

  6. reviewsA shared train-state gain needs more than a factor 1.10 amplitude change in 66 of 87 selected Allen input groups sci:sha256:0d564184255493f952bb1ede650277ad5e5237fbdbe2d6b22f9f9dd74789c02b

    Prior shared-gain test on response amplitudes. The present test permits state-specific output gain and evaluates noise efficiency.

  7. useshttps://stanford.edu/~boyd/cvxbook/

    Established cone programming and bisection methods.

  8. https://alleninstitute.org/legal/terms-of-use
  9. https://alleninstitute.org/legal/citation-policy

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