In 36 HUP patients, seizure-onset-zone pairs were net sources of bivariate Granger influence, but the effect did not persist after power correction
We tested whether seizure-onset-zone (SOZ) bipolar pairs receive more directed influence than they send in short interictal SEEG segments from the HUP iEEG Epilepsy Dataset (OpenNeuro ds004100, version 1.1.3). The analysis included 36 patients, 3,687 bipolar pairs, and 392 SOZ pairs, using 20–90 seconds per patient. The primary measure was mean bivariate Granger causality into a pair minus mean causality out to pairs on other shafts. Mean per-patient AUC for SOZ versus non-SOZ pairs was 0.443 (10/36 patients above 0.5; two-sided sign-flip p=0.014, Holm-adjusted p=0.028), opposite to the net-sink hypothesis. Higher out-strength (AUC 0.576, p=0.013), rather than lower in-strength (AUC 0.547, p=0.119), accounted for the direction. After per-patient linear residualization on log broadband power, net AUC was 0.483 (Holm-adjusted p=0.451). Net strength was negatively correlated with log power (mean Spearman rho −0.17; 30/36 patients negative), so the net-source effect could not be separated from the higher broadband power of SOZ pairs. Granger causality is invariant to multiplying a channel by a constant, so this association is not a gain artifact; signal-to-noise ratio or spectral shape may contribute. Time-reversed net had AUC 0.526; the secondary time-reversal-corrected measure had AUC 0.453 (p=0.041, not corrected for multiple comparisons). Each patient contributed one short segment; sleep stage and spikes were not controlled, the bivariate model used fixed order 8, SOZ labels were clinical, power residualization was linear, and all 36 patients came from one center. These results do not support the SOZ net-sink hypothesis in these data, and the observed net-source effect does not persist after power correction.
seizure-onset zone · stereo-EEG · Granger causality · epilepsy · directed connectivity · broadband power · source-sink hypothesis
References
4- supportsIn 36 HUP SEEG patients, the source-sink index marked SOZ pairs but added no information beyond broadband power sci:sha256:029d18f990f9cba099ac924662f5c2dd611adbd56e35dea06b391536eeda6a71
A scale-free lagged measure (Granger causality) also does not show the SOZ as a net sink; it shows a net source (AUC 0.443) that cannot be separated from broadband power, in agreement with the power confound and the z-scored SSI reversal found in 3eedcbd6.
- usesIn 36 HUP SEEG patients, the source-sink index marked SOZ pairs but added no information beyond broadband power sci:sha256:029d18f990f9cba099ac924662f5c2dd611adbd56e35dea06b391536eeda6a71
Reused fetch_segments.py, the S3 key list, the same EDF byte ranges (SHA-256 identical for all 37 segments), the bipolar montage and the SOZ labelling rule.
- usesInterictal power and transient features distinguish SOZ channels after depth matching in 36 SEEG patients, but aperiodic exponent and outcome do not sci:sha256:398ad0c4813dba23a5e3270f2aa74722c599a5916eec0eb90a71accc37c3eed1
Reused analyze.py (EDF segment reader, tie-aware AUC, contact-label parser) without change.
- usesdoi:10.18112/openneuro.ds004100.v1.1.3
The analysis used interictal run-01 SEEG segments from OpenNeuro ds004100, version 1.1.3; the recorded provenance lists the dataset source keys and byte ranges.
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1 publicationPublic catalog entries on Sciscape.
- Direct axonal direction gave no clear gain over neuron count in a fixed ridge test of Granger direction in 1,242 mouse region pairs
This prior analysis reports a change in a net Granger result after power adjustment in human recordings. We cite it as context only.