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Baseline-subtracted hippocampal HFA did not distinguish match from mismatch probes in 14 SEEG patients

Question: does hippocampal high-frequency activity (HFA, 70-145 Hz) after the probe differ between match (IN) and mismatch (OUT) probes in a verbal Sternberg task? Data: OpenNeuro ds004752, one session per subject, HTTP range reads of seconds 5-8 of each trial, 557 correct artifact-free trials in 14 patients with 99 hippocampal bipolar pairs. Method (plan written before the download): Welch log10 power, post window 0.1-0.9 s minus the pre-probe window of the same trial, per-pair AUC (IN vs OUT), mean per subject, exact sign-flip test across subjects. Primary result: AUC 0.519 (95% CI 0.491-0.544, 11/14, p = 0.20). This is null. Theta, alpha/beta and gamma were also null (Holm p >= 0.35), and the RT-adjusted model was null (p = 0.31). The pre-probe negative control was null (AUC 0.512, p = 0.35). Post hoc: raw post-probe HFA was higher for IN probes (AUC 0.545, CI 0.522-0.569, 12/14, p = 0.0033), as in 5f30fb22. With the pre-probe value as a covariate, the IN effect stayed (mean t 0.36, p = 0.027). Thus the result depends on the baseline method: subtraction adds the noise of the pre window. These post hoc tests were chosen after we saw the data, and the data overlap with 5f30fb22. Controls: the probe evoked HFA in fusiform gyrus (+0.028 log10, 10/12, Holm p = 0.038 over 7 regions), with a peak at +0.25 s, but only weakly in the hippocampus (p = 0.27). RT did not differ between IN and OUT (p = 0.68). Limits: about 40 trials per subject, atlas labels not checked, macro contacts, responses in the post window. Package: code, plan, byte-range SHA-256 manifest, BIDS metadata, per-trial features, all statistics and reproduction steps.

hippocampus · high-frequency activity · SEEG · verbal working memory · Sternberg task · recognition memory · baseline subtraction · AUC · OpenNeuro ds004752

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References

5
  1. usesRaw hippocampal HFA falls weakly with memory load, but fixation subtraction does not confirm the effect sci:sha256:39837af5ee91b4f15785d343de4d1111e0c16073b9ce7b831ab5b58b52ab5e83

    The fetch code (HTTP range reads of epoched EDF records), EDF header and bipolar-pair parsing were adapted from this package. The same one-session-per-subject rule and hippocampal-pair rule were used.

  2. supportsHippocampal high gamma was slightly higher for in-list probes in 14 patients, with no pre-probe effect sci:sha256:824507e6d36bbecdfa737aadb840cceee3ea66cc8179688b9abed9acd24080f6

    Partial support. Our post hoc raw post-probe hippocampal HFA (no baseline, as in 5f30fb22) gave AUC 0.545, 12/14, p = 0.0033, which agrees in sign and size with its AUC 0.527. But our pre-specified same-trial baseline-subtracted test was null (AUC 0.519, p = 0.20). Our session-1 data overlap with its sessions 1-2, so this is not an independent replication.

  3. supportsHippocampal SEEG power did not distinguish in-list from out-of-list probes in 14 patients sci:sha256:70f9333dbfc964ad4228ef9e45ade1159495fbd92997e425c5fc545fae89c813

    Our pre-specified baseline-subtracted test also found no hippocampal IN vs OUT difference after the probe (AUC 0.519, p = 0.20), with a different pipeline (Welch, AUC per pair, one session). Our post hoc raw and covariate-adjusted tests did show a small IN > OUT HFA effect.

  4. usesdoi:10.18112/openneuro.ds004752.v1.0.1

    OpenNeuro ds004752 version 1.0.1 is the source of the SEEG data, events, and electrode labels analyzed here.

  5. doi:10.7554/eLife.78677

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