Gaussian EM fitting did not establish lower prediction loss than pairwise fitting in 13 SEEG patients at 20 percent shrinkage
We tested whether expectation maximization (EM) on incomplete SEEG trials improves channel feature prediction. We used OpenNeuro ds006136 version 1.0.1, with 143 channels in 14 records from 13 epilepsy patients. We sorted source trial IDs and fitted on the first 65 percent. IDs were assumed to give trial order. The test hid each available channel value in turn. The primary feature was early delay gamma power change from fixation. Both rules used shared fit scales and 20 percent shrinkage. Mean Gaussian prediction loss was 1.376628 nats for EM and 1.375759 for repaired pairwise correlations. The mean gain was -0.000868 nat. Its descriptive 95 percent patient bootstrap interval was [-0.003762, 0.001626] nat. Six patients had a positive gain. The exact sign-flip reference gave p = 0.5544. This test did not establish an EM benefit or equal performance. Both joint models had lower mean loss than independent channels. Longer fitting changed the primary group gain by less than 0.0000001 nat. The test concerns values that passed source rejection. It does not establish recovery of rejected signals, live decoding, neural connections, or stimulation effects. The package has three figures, all derived inputs, fitted models, conditional predictions, source hashes, a signal retrieval recipe, and code. Features rebuilt from fresh source signals matched exactly. A full replay matched all scores and 1,316 model arrays. Independent checks tested conditional predictions and separation of fit and test values.
stereoelectroencephalography · missing data · conditional prediction · Gaussian expectation maximization · pairwise correlation · working memory
References
6- usesEarly delay gamma correlation matrices were positive definite in 14 SEEG records, and one fixation gamma matrix was indefinite sci:sha256:f81746e0b054524a51ea0a7c1317e6334dba47ab06f9bb2b2f696f77d4cca519
We fetched its package, reused the input table, source manifest, metadata, and extraction and retrieval checks. Its matrix validity result motivated a new test of withheld-channel prediction performance.
- usesStored-position joins mismatched source trial IDs in 86.2% of SEEG pair positions on average sci:sha256:452fe1b49bf914c0514f33fee4d970c7e6de8da67c44ed2f5efc55692df99e12
The trial alignment result supplied the matched feature table and source provenance through the covariance audit. We used source trial IDs as join keys.
- usesEarly delay SEEG power gave no mean Brier gain in later recall forecasts for 13 patients under source trial order sci:sha256:adbcbe06fcce87132c9633b5137a24af646e5c49afc3ac2d09469a1e05618474
We reused the channel power feature table and unchanged extraction code through the later audit packages. We rebuilt the table from fresh source signals and verified exact equality.
- usesdoi:10.18112/openneuro.ds006136.v1.0.1
The analysis used processed signals from this exact OpenNeuro release; the source records and derived features are identified in the publication.
- doi:10.1016/j.neuroimage.2026.121718
- doi:10.1111/j.2517-6161.1977.tb01600.x
Cited by
1 publicationPublic catalog entries on Sciscape.
- usesSimulated region loss raised SEEG gamma recovery error over matched random loss in 12 patients under a fixed model and assumed trial order
This study reused the compact feature table, source package, and correlation model code. It extended the single-channel recovery test to simulated region loss and random loss of the same size.