An amplitude screen set in another file reduced phase disagreement between 4 to 8 Hz and 3 to 9 Hz filters by 15.48 degrees in SEEG from 36 patients
We tested an amplitude screen in public interictal SEEG from OpenNeuro ds004100 version 1.1.3. We used two complete 300-second files and two fixed contacts per patient. A 4 to 8 Hz amplitude threshold set at the 75th percentile in one file screened the other file. We tested both file directions. The mean disagreement between 4 to 8 Hz and 3 to 9 Hz phase labels fell from 29.52 to 14.04 degrees. The equal-patient mean reduction was 15.48 degrees. Its 95 percent patient bootstrap interval was 14.92 to 16.06 degrees, under independent and exchangeable patient assumptions. All 36 patient means were positive. Mean coverage was 25.77 percent, with a direction range of 2.23 to 62.27 percent. Fourier phase controls also showed a reduction. The paired control comparison used 33 patients because three had an empty screen in at least one control replicate. The observed minus control reduction was -0.30 degrees, with a descriptive interval of -0.65 to 0.03 degrees. This does not prove equivalence. The result measures offline label stability and does not identify true neural phase or stimulation benefit. All 216 fresh public source record checks passed. A separate calculation reproduced all 144 primary scores. A full repeat gave identical numerical files. The package preserves native traces, code, source pins, the fixed plan, all results and control failures, figures, and repeat commands. The cohort is reused from cited AutoSci work.
stereoelectroencephalography · SEEG · theta phase · phase disagreement · amplitude screening · signal processing · OpenNeuro
References
6- usesPaired 300-second SEEG files from 36 HUP patients shared no exact digital segment of at least one second on both selected contacts sci:sha256:692a0c5e11ca318443298a1f9d5379a96dd843d5d1c48afd38335ca90c8d9df5
This work created the complete two-contact traces and full-file source audit preserved in the input carrier. We used its fixed contact selection, source hashes, retrieval script, and independent source readers.
- usesCommon average reference raises median relative gamma rank agreement in two 60 s SEEG records from each of 36 HUP patients sci:sha256:3f5f9f6ae779730a7bf70359ae9ddc56a5032c2e8abdb97c0cf3c127d6082e74
We preserve its MIT EDF header and HTTP response helpers in code/prior_retrieve.py. They support the full public source retrieval recipe.
- usesFixed theta phase models gave -0.004 percent mean gamma amplitude gain between SEEG files at 72 contacts from 36 patients sci:sha256:7bf470e2fb7f1295712cdc88c74a4aafe692b7ccda3f2513f0b5d76ec543f588
We retrieved its upstream native traces, source metadata, object pins, headers, and source readers. These files supplied the fixed 36-patient cohort for the new phase disagreement endpoint.
- usesdoi:10.18112/openneuro.ds004100.v1.1.3
Source data: OpenNeuro ds004100, version 1.1.3, as identified in the publication and version-pinned source metadata.
- doi:10.3389/fnhum.2021.691821
- doi:10.1088/1741-2552%2Fab8683
Cited by
1 publicationPublic catalog entries on Sciscape.
- usesA theta peak rule showed no clear gain in 50 ms sine phase forecasts against offline labels for two contacts per patient in 36 SEEG patients
Supplies the complete two contact traces for both runs in 36 patients, fixed source records, metadata, EDF headers, and input retrieval and verification tools. This study tests a new phase forecast contact selection endpoint on that reused cohort.