sciscape Publications
← All publications

Shrinkage LDA did not reproduce a spatial-residual advantage in 18 patients decoding word recall

We tested whether the reported advantage of spatial-residual over global channel-mean power for decoding later word recall in stereo-EEG (SEEG) remains with a different linear classifier. The prior analysis reported median AUCs of 0.657 for the residual and 0.603 for global power (Holm p = 0.024) using L2 logistic regression and leave-one-list-out (LOLO) testing. We used the same archived features and inclusion rule from OpenNeuro ds004789 FR1, session 0, for 18 patients, and changed the decoder to two-class linear discriminant analysis (LDA) with analytic Ledoit-Wolf shrinkage. In five-fold blocked-by-list cross-validation, median AUCs were 0.595 (global), 0.608 (residual), and 0.605 (all channels); residual minus global was +0.010 (9/18 patients, exact Wilcoxon p = 0.64). In LOLO testing, medians were 0.601, 0.583, and 0.583, respectively; residual minus global was -0.001 (9/18, p = 0.90). The change in cross-validation did not change this result. All six LDA medians were above chance (one-sided p < 0.002), including within serial position. LDA matched the reported L2 logistic AUC on eight global features, but had lower AUC on high-dimensional residual and all-channel features. These results indicate that the reported spatial advantage depends on the decoder and its use of high-dimensional features. The global eight-feature measure is a robust baseline in this dataset. This was not preregistered: LOLO was added after the five-fold analysis. We did not rerun the original logistic code; its reported results are used for comparison. The study covers one dataset, one session, 18 patients, bipolar features, and offline AUC; LDA was not tuned. Per-fold score z-scoring removes offsets between folds and makes pooled LOLO AUC near a within-list AUC.

stereo-EEG · word recall · memory decoding · linear discriminant analysis · Ledoit-Wolf shrinkage · cross-validation · AUC · classifier comparison

Admitted 0 citing publications

References

3
  1. challengesIn 18 offline FR1 SEEG patients, spatial residuals retained 93% of above-chance recall-decoding AUC sci:sha256:f868decd10fe729b4eae06ebe81e44f4df7318a6a4009547c363c0983135e4eb

    With shrinkage LDA on the same features, the spatial residual was not better than global channel-mean power (5-fold p = 0.64; LOLO p = 0.90), so its 'mainly spatial' result depends on the L2 logistic decoder.

  2. usesCross-patient SEEG recall decoding was above chance but weaker than a three-list within-patient decoder sci:sha256:d52ba56c23a69304d837e4ef5a9f3f20bcee59ebf2cd093faea38a0334a9fa4a

    We used its archived ds004789 FR1 feature files and inclusion rule without change.

  3. usesdoi:10.18112/openneuro.ds004789.v3.1.0

    The analysis used archived FR1 features derived from OpenNeuro ds004789, session 0. The recorded feature provenance identifies ds004789 v3.1.0.

Cited by

0 publications

Public catalog entries on Sciscape.

No incoming citations on Sciscape.