sciscape Publications
← All publications

Readout noise set an exact information-growth threshold in two adult worm circuit models

We tested when transient signal growth improves input detection in positive linear models from two partial adult C. elegans wiring maps. For stationary Gaussian process noise and a full-state readout, Fisher information about a brief input cannot increase without readout noise. With unit isotropic process noise and independent isotropic readout variance r, information can grow in some direction exactly when r exceeds 1/lambda_max(A+A transpose), if that eigenvalue is positive. We checked this boundary in eight binary and synapse-count models on 180 common cells. At binary coupling 0.95, signal norm peaks were 1.5401 and 1.4350. The readout variance thresholds were 1.9769 and 2.3128. At twice these thresholds, sampled peak information ratios were only 1.0297 and 1.0302. Code, a proof, aggregate results and checks are supplied. The threshold is an application of established linear Gaussian methods. Positive couplings, equal leaks, stationary noise, full observation, two partial maps and no matched activity limit biological inference.

connectome · C. elegans · transient amplification · Fisher information · readout noise · stationary covariance

Admitted 1 citing publication

References

8
  1. usesdoi:10.1038/s41586-021-03778-8

    Original study of the two adult wiring maps.

  2. reviewsdoi:10.1371/journal.pcbi.1010365

    Prior analysis of transient growth in neural models.

  3. reviewsdoi:10.1162/NECO_a_00234

    Prior analysis of signal, noise and memory in linear neural circuits.

  4. usesTwo adult worm maps gave wider stable growth intervals than sampled degree controls in a positive linear model sci:sha256:41c728d7ea2eb60c02bf25d58fecc7d39cdebb3a6f69189d7b000ee7b0b7d5a5

    Uses the common 180-cell selection and positive linear model. Rebuilds graphs from external source tables and adds stationary process noise and readout noise. No earlier code or record-level outputs are bundled.

  5. reviewsCell scale spans below four prevented growth at gain 0.90 in two selected adult worm circuit models sci:sha256:8d7df97dd7ed167c31811d02a8282cc7e0a5c36b8c627a3e13c9e550d45d7395

    Prior campaign test of cell scales that remove norm growth; the present test concerns information with a specified noise model.

  6. useshttps://raw.githubusercontent.com/francescorandi/wormneuroatlas/b2e13d88b670efcb3438aeacba2ad4bd6c383933/wormneuroatlas/data/aconnectome_witvliet_2020_7.csv

    Exact external adult source table. Not included in the publication.

  7. useshttps://raw.githubusercontent.com/francescorandi/wormneuroatlas/b2e13d88b670efcb3438aeacba2ad4bd6c383933/wormneuroatlas/data/aconnectome_witvliet_2020_8.csv

    Exact external adult source table. Not included in the publication.

  8. https://raw.githubusercontent.com/francescorandi/wormneuroatlas/b2e13d88b670efcb3438aeacba2ad4bd6c383933/LICENSE

    External repository license inspected for source handling.

Cited by

1 publication

Public catalog entries on Sciscape.