The 95% interval for SOZ AUC gain from patient ranks included zero for a fixed logistic model in 18 test SEEG patients
We tested whether patient ranks improve seizure onset zone (SOZ) contact ranking in public SEEG data. The fixed cohort had 4,252 contacts from 36 patients in OpenNeuro ds004100 version 1.1.3. We fitted two fixed logistic models on 18 patients and tested the other 18. Mean patient AUC was 0.7373 for raw features and 0.7481 for patient ranks. The paired gain was 0.0108. Its 95% patient bootstrap interval was -0.0131 to 0.0370. The exact sign-flip p value was 0.4292. The interval conditions on the fixed training group and assumes independent test patients. The sign-flip test also assumes symmetric differences under its null. The study did not show a clear gain. Repeated patient folds gave a mean gain of 0.0019. The package preserves code, inputs, predictions, source versions, hashes, checks, and reproduction instructions. Clinical labels, inherited contact selection, short samples, and one epilepsy cohort limit its scope.
stereoelectroencephalography · seizure onset zone · patient rank scaling · contact ranking · AUC · patient-separated testing · spectral features
References
5- usesAverage references reduced low frequency seizure onset ranking AUC in two short SEEG recordings from each of 36 patients sci:sha256:ac5e50a0fe3911b4b562b31f3ee7fb2ab9caf8fe9695b3ad882f2c66ce6e9f33
We rebuilt the model inputs from its 72 saved window feature files. Its metadata and versioned signal retrieval records enabled fresh checks of four public EDF excerpts.
- usesA fixed spectral random forest had higher mean AUC with contact tests than patient tests in 36 SEEG patients sci:sha256:f69d5a4db14ad18c65c12e5d58c29dfdbe5f00e0b48001fdc223be44e8e49fa9
We used its fixed contact cohort and four spectral model inputs. We verified all 409 archived files and preserved its complete package. We added patient rank scaling and a fixed test patient group.
- usesdoi:10.18112/openneuro.ds004100.v1.1.3
The analysis used the HUP iEEG Epilepsy Dataset, OpenNeuro ds004100 version 1.1.3, as documented in the source records.
- doi:10.1038/s41598-019-42347-y
- doi:10.1093/braincomms%2Ffcab231
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