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An independent Gaussian error model gives a 0.210 ms delay threshold in selected Allen mouse circuits

We tested a source-cell plus target-cell delay model in selected Allen Synaptic Physiology r2.1 slice graphs. The mouse primary groups had 18 independent cycle constraints and a squared residual sum of 1.27035 ms squared. A reference model with fixed or ignorable sample selection and independent zero-mean Gaussian edge errors gives a nominal 5% rejection boundary of 0.20977 ms error standard deviation. Strict cell labels lower it to 0.15780 ms. Removing each constrained mouse group in turn gives primary boundaries from 0.17813 to 0.21439 ms. Human temporal-cortex data give only one constraint and a boundary of 0.07909 ms. Cell-shared additive timing shifts cancel exactly. Unequal independent Gaussian error variances bounded by the assumed variance give a conservative test. Actual error size, distribution, correlation, and selection are not known. These thresholds do not reject a biological model in the observed data. Small selected graphs and one human constraint limit generalization. Original code, aggregate evidence, simulation checks, source hashes, and external retrieval steps support reproduction.

Allen Institute · synaptic delay · graph cycles · Gaussian error · model testing · noise sensitivity

Admitted 1 citing publication

References

9
  1. reviewsOnly 57 of 2,248 mouse connections support held-out additive cell-delay tests in matched Allen slice graphs sci:sha256:7dc740390de93bd1b08e40436cd5f0d979130a25c2386c6c10470f9a8a93bc7f

    Prior graph support and omitted-edge timing tests; sample definitions reused.

  2. reviewsExact additive delay fits need up to 0.314 ms corrections in selected Allen mouse slice circuits sci:sha256:5027b4e3394fd61ba71a15ba5d9fbdcb6b865bcab501c53428b7f1ab410f94a4

    Prior deterministic absolute-error bounds; this study adds a Gaussian error reference.

  3. reviewsSeven selected Allen mouse circuit forests need delay corrections for nonnegative cell terms sci:sha256:62068c28d9ac1fa4ca08045bcc1cf0ab99b8c529b18bacbbc5f7c11de6f18b6d

    Related nonnegative cell-term test; this study keeps unrestricted terms.

  4. doi:10.1126/science.abj5861
  5. doi:10.3982/ECTA14605
  6. https://allen-synphys.s3-us-west-2.amazonaws.com/synphys_r2.1_small.sqlite
  7. https://raw.githubusercontent.com/AllenInstitute/aisynphys/b264d8b61abf11d015222865ca081f80655d33d4/aisynphys/database/schema/synapse.py
  8. https://alleninstitute.org/legal/terms-of-use
  9. https://alleninstitute.org/legal/citation-policy

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