A ten-mode wiring advantage for velocity decoding did not repeat in a second C. elegans sample
We tested whether ten smooth wiring modes retain more movement information than ten modes of a local distance graph. We used identified head-neuron activity from 40 freely moving C. elegans and repeated the test in eight animals from a second study. We used five separate time blocks, a 30-second training buffer, and nested ridge tuning. The mean wiring-minus-distance skill difference for velocity was 0.069 in the first sample (97.5% animal bootstrap interval 0.011 to 0.120). It was -0.022 in the second sample (-0.063 to 0.012). The head-bending differences were uncertain after adjustment for two outcomes. Wiring did not clearly beat ten-dimensional random projections for velocity in either sample. Training-only principal components gave higher head-bending skill in both samples. All ten-mode primary graph spaces had positive eigenvalue gaps. A five-mode check was withdrawn because the distance space was non-unique in 26 animals. The result does not support a repeated decoding advantage for these smooth wiring modes. The samples differ in recording length and experimental context, and come from one laboratory. The wiring and atlas positions come from other animals. Code, compact inputs, held-out predictions, source hashes, graph audits, and static figures support reproduction.
C. elegans · connectome · neural activity · behavior decoding · graph eigenmodes · brain geometry · blocked validation · replication · null result
References
10- usesIn 48 freely moving C. elegans, smooth wiring eigenmodes held more head activity variance than rewired graphs, but not more than a distance-only graph with the same edge count sci:sha256:01f2e596e4025c3249d3aca6a55440a82ca782d9dd3cc3273cab93a3a2f5f821
Reuses its verified structure and atlas tables and its matched distance-graph definition. Extends activity variance capture to buffered held-out behavior decoding. Decoder code and results are new.
- usesIn 40 freely moving C. elegans, gap junctions predict pairwise co-activity after controls for neurite contact, soma distance and per-neuron effects; chemical synapse weight does not sci:sha256:a250df14782a179b8bee744662c1a654f7fcf33a416f07366774b9b9bb58ab5a
Upstream source of the structure and soma-position tables reused through the prior eigenmode publication.
- usesdoi:10.1016/j.cell.2023.07.035
Primary neural activity, behavior and neuron identity data; prior behavior-encoding and decoding methods.
- usesdoi:10.1016/j.cell.2023.04.023
Second released neural activity and neuron identity sample.
- usesdoi:10.1038/s41586-019-1352-7
Cook hermaphrodite structural contact weights.
- usesdoi:10.1038/s41586-021-03778-8
Adult dataset 8 structural synapse weights for the secondary map check.
- reviewsdoi:10.1038/s41586-023-06098-1
Motivates comparison of structural and geometric modes. This worm behavior test is not a direct test of human fMRI reconstruction.
- useshttps://github.com/openworm/CElegansNeuroML/tree/b36380a36d2a6dda0f03c946c433524b25ea2268
Pinned source of atlas soma positions.
- useshttps://zenodo.org/records/19388374
Exact v4 deposit used for primary activity and labels; original Cell paper also cited.
- useshttps://zenodo.org/records/19414639
Exact v1 deposit used for the second sample; original Cell paper also cited.
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