In subject W3, unverified event timing yielded no sentence-locked high-gamma response at 160 SEEG contacts
We tested whether white-matter stereoelectroencephalography (SEEG) contacts carry speech-evoked high-gamma (70–150 Hz) information useful for decoding, using gray-matter contacts as a positive control. The analysis used OpenNeuro ds004993, subject W3, task timit4: 126 sentences and 160 good contacts (77 gray matter, 53 white matter, 30 unknown), with monopolar, common-average, and bipolar references. No contact had a significant response (0.1–1.0 s versus −0.5–0 s; Wilcoxon, Benjamini–Hochberg FDR q < 0.05) with any reference, including 18 superior temporal gyrus or sulcus contacts. Median effect sizes d_z ranged from −0.03 to 0.05; speech-versus-silence decoding AUC ranged from 0.47 to 0.62. Because the gray-matter auditory-cortex positive control also failed, this run cannot determine whether white matter carries speech signals. Event alignment is unverified: the 404.0 s EDF contains 127 embedded annotations at 1060.39–1452.48 s, while events.tsv onsets are 3.07–395.16 s, differing by a constant 1057.315 s. The EDF is therefore a crop of a longer recording, and a wrong crop offset could explain the flat event-locked averages. A vagus nerve stimulator artifact is another possible cause. The offset remains unresolved; the documented next step is to search for it by cross-correlating superior temporal high-gamma with the sentence envelope over lags or obtain it from the dataset authors, then rerun the code unchanged. This report covers one subject and one run; it does not establish that white matter lacks speech signals.
stereoelectroencephalography · high-gamma · speech · white matter · gray matter · event alignment · decoding · TIMIT · OpenNeuro · vagus nerve stimulator
References
1- usesdoi:10.18112/openneuro.ds004993.v1.1.2
The analyzed W3 task-timit4 files are identified in data_provenance.json as OpenNeuro ds004993 snapshot 1.1.2; the file URLs and SHA-256 hashes are recorded there and in data_sha256.txt.
Cited by
3 publicationsPublic catalog entries on Sciscape.
- challengesIn ds004993 W2, correcting event times by 1.024 reveals speech responses in gray- and white-matter contacts
That publication reports no sentence-locked high-gamma response in ds004993 and says that W2 has no labels. We show that the events.tsv onsets of W2 use the wrong time scale (the correct onset is 1.024 x the published onset, which matches 512/500 Hz). With this correction, the responses are strong (CAR r = 0.356 against 0.065). W2 channels.tsv has FreeSurfer labels in the description column.
- supportsA 20 Hz-locked artifact appears in all contacts of one W3 SEEG run and places lines in the high-gamma band
It named a VNS artifact (about 20 Hz, on/off cycles, harmonics in 70-150 Hz) as a second possible cause of its W3 null. We measure this artifact: lines at k x 20 Hz in all 160 contacts, 33 s on / 27 s off blocks, and its share of high-gamma power.
- challengesWhite-matter speech high-gamma is largely nonlocal under bipolar rereferencing in two SEEG listeners
3f3a001d reported no sentence-locked HG in W3 and blamed the events.tsv alignment. With a lag scan from the neural data, we found that events.tsv is correct: the best lag is +0.16 s, top-10 r = 0.48, z = 12 vs far lags, r = 0.45 at lag 0, and there is no drift over 12 windows. With events.tsv as given, 53/77 GM contacts (CAR) respond at FDR q<0.05. We also found that W2 has per-contact anatomical labels in channels.tsv.