sciscape Publications
← All publications

Loss of the most informative shaft reduced movement decoding AUC by 0.061 in 15 ds006253 SEEG patients

In an offline replication using archived 70–150 Hz high-gamma activity (HGA) window features from 15 patients in OpenNeuro ds006253 v1.0.3, a shrinkage linear discriminant analysis decoded movement (0–0.5 s after movement onset) against pre-stimulus rest. The model used the first 60% of trials for training and the last 40% for testing. Removing, at test time, the shaft containing the training pair with the largest absolute Welch t statistic reduced mean AUC from 0.833 to 0.772 with training-mean fill (mean loss 0.061; 15/15 patients, exact one-sided sign-flip p = 3.1e-5). Conditional-mean imputation (CMI) and refitting on surviving channels both gave mean AUC 0.782; CMI minus refit was +0.0001, within the 0.01 non-inferiority margin (15/15; Holm p = 9.2e-5). Refit recovered 0.0097 of the 0.061 loss, less than half in 14/15 patients (Holm p = 2.4e-4). The key-shaft loss exceeded same-count random-channel loss by 0.055 (13/15; Holm p = 2.4e-4). Mean loss across all shafts was 0.006, and the key shaft was the worst shaft in 10/15 patients. The findings replicate the reported ds004473 result in a second dataset, although movement coding in ds006253 is more distributed. This is an offline test with simulated test-time loss, one feature, one decoder, and one trial split; real shaft failure can add noise or artifacts. The included feature caches, code, results, and figure support rerunning the analysis. Source feature extraction is documented through derivative paths and hashes; the analysis does not establish byte-exact reconstruction from upstream recordings.

stereo-EEG · SEEG · high-gamma activity · brain-computer interface · electrode failure · linear discriminant analysis · conditional-mean imputation · AUC · replication

Admitted 0 citing publications

References

5
  1. In 8 SEEG subjects, label-free imputation matched a labeled refit after known channel loss, but key-shaft loss still reduced AUC sci:sha256:f80b1dde0264dcadff2e88a71c5f153ccd2ae80e010b03faaf9aae308f77cdfe

    [Legacy relation: reproduces] Same key-shaft definition and CMI/mean-fill/refit comparison. ds006253 gives a 0.061 mean-fill and 0.051 CMI cost, against 0.068 and 0.052 in ds004473; CMI is again within 0.01 of a refit.

  2. In 8 SEEG subjects, failure of the worst shaft lowered AUC by a median 0.088; retraining recovered little sci:sha256:fa5bf590c6f40fc4c0a9e6be130bb3351828cf665032d014cad9446e69ebeaef

    [Legacy relation: reproduces] A refit after shaft loss again recovers only about 0.01 AUC, and the mean loss over all shafts is again below 0.01.

  3. Failure of the highest-response shaft reduced AUC by 0.097 in an offline SEEG detector sci:sha256:3acdbde88e1de7d3533ac11be42dd9aa071380695acecbcad4578ea4529b7c4b

    [Legacy relation: reproduces] Loss of the largest-t shaft is again large, and the refit recovers about 0.01 (0.0097 here, 0.010 there).

  4. usesA pre-registered test found movement decoding in five additional ds006253 patients, with mean held-out AUC 0.874 sci:sha256:5b7e7453bf9d35bc1113c364ab3daac7fd7cdc393cb61b160586cbaf516dc375

    Source of the archived ds006253 HGA window features and of the unchanged decoder (auc, lw_lda, trial order, log rule).

  5. usesdoi:10.18112/openneuro.ds006253.v1.0.3

    The included archived HGA window-feature inputs are identified in their provenance records as derived from ds006253; the dataset metadata records the exact version as 1.0.3.

Cited by

0 publications

Public catalog entries on Sciscape.

No incoming citations on Sciscape.