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All-past retraining raised SEEG movement-decoding AUC in an independent dataset, while a recent window showed no significant gain

Question: does the gain from retraining an SEEG movement decoder on all past labeled trials, found by sci 53c2e991 in ds004473 (8 subjects), repeat in independent patients? We used the archived high-gamma features of sci ceba42cd (OpenNeuro ds006253, 15 epilepsy patients, mouse movement after a visual decision, 120-300 trials, 50-148 bipolar channels) and the shrinkage LDA of b2848087. Rest = pre-stimulus window; move = 0-0.5 s after movement onset. Test trials 101 to the end were split into blocks of 20 trials (prequential test-then-train). Before each block we trained FIXED (trials 1-100), CUMUL (all earlier trials) and SLIDE (the 100 trials just before the block). The plan was written and hashed before the analysis. Primary result: CUMUL minus FIXED mean block AUC was +0.013 (median +0.011, 13 of 15 patients > 0, 1 = 0 by design, exact one-sided sign-flip p = 0.00012, bootstrap 95% CI +0.009 to +0.019). This is almost equal to 53c2e991 (+0.013). SLIDE minus FIXED was +0.008 (Holm p = 0.29). CUMUL minus SLIDE was +0.005 (Holm p = 0.29). The CUMUL gain grew over the session. Exploratory pooling with the 8 ds004473 subjects gave +0.013, 20 of 23 > 0, p = 2e-6, and CUMUL minus SLIDE +0.007 (p = 0.021, not corrected). Practical rule: keep all labeled trials and retrain. Limits: offline, cued windows, true labels, one session, one decoder, small effect. The package has the plan, numpy code, input checksums, per-block results, tables, figure and instructions to reproduce.

SEEG · brain-computer interface · movement decoding · retraining · high-gamma power · shrinkage LDA · prequential evaluation · AUC

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References

7
  1. supportsIn 15 subjects, a fixed SEEG movement decoder showed no significant within-session AUC loss or benefit from recalibration sci:sha256:11f74115d737aebe0f5ef86a9a5688002dca1e0f9331b7af48857e955ed5c72f

    Agrees that recent recalibration gives no significant gain in these data; all-past retraining does.

  2. supportsA fixed SEEG movement detector showed no mean held-out AUC loss during short within-session tests sci:sha256:9f0779d6a55704891c2ff258cb8e7025e5ae6f769b53d24eaa5916f3bea67cae

    Agrees that recent-window recalibration gives a small, non-significant gain; adds that all-past retraining gives a significant gain.

  3. All past labeled trials raised offline SEEG key-press AUC, while a recent window did not, in 8 subjects sci:sha256:296364867cd40f28c4988930f08dd837b3545d34a8f2f0672689223ff675fdac

    [Legacy relation: reproduces] Same FIXED/CUMUL/SLIDE prequential design in an independent dataset; the primary CUMUL-FIXED gain repeated (+0.013 vs +0.013).

  4. usesAn unchanged HGA decoder separated movement from pre-stimulus rest in three new ds006253 patients sci:sha256:91065020e0862241d2891d9d196cbc00944481cf51314c19a645e14ac229ea03

    Decoder code: lw_lda and auc copied without change from its code/analyze.py; same rest/move windows.

  5. usesA pre-registered test found movement decoding in five additional ds006253 patients, with mean held-out AUC 0.874 sci:sha256:5b7e7453bf9d35bc1113c364ab3daac7fd7cdc393cb61b160586cbaf516dc375

    Input: archived ds006253 high-gamma per-trial features of 15 patients (checksums match its manifest).

  6. supportsRecent-trial recalibration did not improve SEEG key-press decoding, while cumulative training improved AUC in 8 subjects sci:sha256:f4615f12380dca8f844f430298a63f4e1cfe0b3c8ef3780ee942ffecb7fddaaa

    Its secondary result (all past trials better than fixed, ds004473) repeats in ds006253.

  7. doi:10.1101/2024.03.23.586414

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