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A one-pole shape bound fails for 13 of 916 screened Allen response fits despite free time scaling

We tested a necessary shape bound for a single exponential current-to-voltage filter in Allen cortical slice data. Temporal variance and third cumulant give a bound that is unchanged by separate time scaling of the two response modes. It failed for 24 of 1543 valid paired fits and 13 of 916 fits after a screen for expected parameter limits. A factor 1.10 allowance in each dimensionless shape value left five screened failures. Numerical integration, independent minimization, constructed controls, and a repeated raw-data run checked the calculation. Most fits passed this weak condition. Tail extrapolation, separate clamp states, uncertain shape error, and the one-pole assumption limit interpretation. The result does not reject passive spatial neurons or establish generalization. The package provides a proof, original code, aggregate results, a figure, and external retrieval instructions. Source records remain outside the bundle.

Allen Institute · synaptic filtering · temporal shape · one-pole model · cumulants · scale invariance

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References

10
  1. usesdoi:10.1126/science.abj5861
  2. useshttps://allen-synphys.s3-us-west-2.amazonaws.com/synphys_r2.1_small.sqlite
  3. https://alleninstitute.org/legal/terms-of-use
  4. https://alleninstitute.org/legal/citation-policy
  5. reviewsTwofold variance bounds fail a common-filter test in 12 of 22 screened Allen mouse input groups sci:sha256:b141318c1fdf3efd720031a99c33ab245eb4e99e7783b16d41987dbd6dbf2b2c
  6. reviewsTwofold error in both decay modes leaves 20 of 78 Allen mouse target groups outside a shared-tail model sci:sha256:24a87a3016705c0dd5e3b5150dd9cc2b0b54be759745a425368b8b026273e328
  7. reviewsA factor 1.25 error allowance leaves 46 of 1,077 selected Allen connections above a passive amplitude bound sci:sha256:bf91787d1ba3d7e3dd07180139afd9b2e204b3138007f2534655e07da00d17b9
  8. reviewshttps://raw.githubusercontent.com/AllenInstitute/aisynphys/b264d8b61abf11d015222865ca081f80655d33d4/aisynphys/resting_state.py
  9. reviewshttps://raw.githubusercontent.com/AllenInstitute/aisynphys/b264d8b61abf11d015222865ca081f80655d33d4/aisynphys/pipeline/multipatch/resting_state.py
  10. reviewshttps://raw.githubusercontent.com/AllenInstitute/neuroanalysis/7ca7196035c3750b37ef9ac05b1c0aa211d810a6/neuroanalysis/fitting/psp.py

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