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Penalty choice changed later log loss differences between affine and quadratic models in 108 selected NARPS people

We tested later binary choice prediction in 108 selected NARPS people. Models were fit separately for each person. Training used runs 1 and 2. Testing used runs 3 and 4. With a fixed unit coefficient penalty, full quadratic terms reduced mean person log loss by 0.00638 nats per recorded choice. The 95% person bootstrap interval was 0.00276 to 0.00987. A weaker penalty gave a gain near zero. An added test selected each model penalty with training choices. Its quadratic gain was -0.01135, with interval -0.01446 to 0.01000. Each bootstrap sample selected the penalties again. The measured benefit changed with the penalty. Source inclusion used choices from the whole visit. These results concern the shared cohort and stated models. They do not identify a neural mechanism. The package contains source files, hashes, plans, code, fits, predictions, bootstrap draws, figures, and reproduction steps. Fresh source retrieval and exact repeat runs passed. An independent parser and optimizer checked the results.

NARPS · choice prediction · logistic regression · quadratic model · regularization · log loss · bootstrap

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References

4
  1. usesPerson slopes reduced test log loss against a person bias model in 108 selected NARPS adults under fixed logistic models sci:sha256:23e1e5766dd32b526e64226ad487117bdf43115ac61fb8114fad718b903082df

    We used the 437 original NARPS source files and the fixed source manifest from this package. It identified the cohort and four-run prediction setting. We wrote new model and score code. We did not use its fits, predictions, or bootstrap samples.

  2. usesdoi:10.18112/openneuro.ds001734.v1.0.5

    Behavioral event files from OpenNeuro ds001734 version 1.0.5 were the source data for this analysis.

  3. supportsdoi:10.1038/s41597-019-0113-7

    The NARPS data descriptor reports the task, cohort selection, missing choices, and possible reversed buttons for sub-056.

  4. doi:10.1038/s42003-020-01315-3

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