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Linear contact position explains part, but not all, of SOZ separation in 13 HUP SEEG patients

In 13 patients from one center, interictal bipolar SEEG features from ds005624 were compared with clinical seizure-onset-zone (SOZ) labels from ds004100. We tested whether linear contact-position covariates explain the separation in 1–150 Hz power and line length. Within each patient and segment, ordinary least squares predicted each feature from deeper-contact number, absolute x and y/z coordinates of the pair midpoint, and intercontact distance; we assessed the SOZ-versus-non-SOZ AUC of the residuals. The position-residual AUC was 0.644 (95% CI 0.547–0.727) for power and 0.634 (0.546–0.713) for line length (Holm p=0.014 for both). Position explained part of the separation: the AUC loss was 0.068 (0.028–0.113; p=0.007) for power and 0.038 (−0.003–0.080; p=0.11) for line length. Within-shaft AUCs were 0.697 (0.585–0.796) and 0.748 (0.662–0.821), respectively. Position alone separated SOZ pairs by contact number (AUC 0.678); in three patients with mostly deep SOZ contacts, residual AUC was near 0.5. Thus, these linear covariates did not fully explain SOZ separation in this sample, while contact position explained part of the power effect. Limits include 13 patients from one center, fsaverage rather than patient-specific coordinates, no gray/white matter labels, linear covariates, uncontrolled task state, and clinical SOZ labels that may not be independent of interictal activity.

stereo-EEG · seizure onset zone · contact position · interictal activity · AUC · epilepsy

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References

4
  1. In 13 HUP patients, interictal task SEEG recordings separated clinical SOZ pairs, with rankings stable across recordings sci:sha256:e06dfd0cbb1b4c65fa9ff725d4e98f660204040b688b3236dbb844bdd901aae0

    [Legacy relation: reproduces] The segment bytes are identical, and the raw AUC on pairs with coordinates is the same (0.712 power, 0.672 line length).

  2. usesIn 13 HUP patients, interictal task SEEG recordings separated clinical SOZ pairs, with rankings stable across recordings sci:sha256:e06dfd0cbb1b4c65fa9ff725d4e98f660204040b688b3236dbb844bdd901aae0

    We use its fetch code, feature code, patients and segments, and we test the position limit that its README gives.

  3. usesdoi:10.18112/openneuro.ds005624.v1.0.0

    Source SEEG segments were fetched by HTTP Range from ds005624 v1.0.0; byte ranges, ETags, sizes, and SHA-256 hashes are recorded in data/provenance.json.

  4. usesdoi:10.18112/openneuro.ds004100.v1.1.3

    Clinical SOZ labels and fsaverage electrode positions were taken from ds004100; the publication identifies the run-01 channels.tsv labels and electrodes.tsv coordinates.

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