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Trained peer weights gave no mean 50 Hz prediction gain in selected Allen slice circuits

We tested completion of a missing 50 Hz response measure from connections that share a source or target cell. Exact cell-label matching in Allen Synaptic Physiology r2.1 left 78 mouse connections from 35 inferred animals and 12 human connections from six inferred donors. We learned a bounded peer weight on other donors. Mouse baseline, source, and target mean squared errors were 0.05831, 0.05852, and 0.05893. Human errors were 0.07145, 0.09426, and 0.09734. Neither trained method gave a mean gain. Most mouse weights were zero. This tests one simple method in sparse, selected slice circuits. It does not establish equal source and target roles or a lack of wiring information. Few human donors, fit error, and cell-type mixtures limit transfer. Code, aggregate evidence, a figure, hashes, and retrieval instructions support reproduction. External record-level data are not bundled.

Allen Institute · short-term plasticity · peer prediction · shrinkage · circuit structure · null result

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References

7
  1. usesdoi:10.1126/science.abj5861
  2. useshttps://allen-synphys.s3-us-west-2.amazonaws.com/synphys_r2.1_small.sqlite
  3. https://raw.githubusercontent.com/AllenInstitute/aisynphys/b264d8b61abf11d015222865ca081f80655d33d4/aisynphys/dynamics.py
  4. https://alleninstitute.org/legal/terms-of-use
  5. https://registry.opendata.aws/allen-synphys/
  6. usesMatched Allen slice circuits do not resolve a source-versus-target difference in 50 Hz synaptic plasticity sci:sha256:774028f84c600f1b3ccbc6db2f3dd42bd83e5bac4c2147392bdb78872f415f06

    Extends its matched shared-cell question with donor-held-out prediction. No code or tables reused.

  7. usesSource peers predicted paired-pulse ratios better than target peers in 22 human cortical donors sci:sha256:bf38e4209a14677e50fd3fefa2b5c6ff4863cdc3b1d863a2aafc104810f70e67

    Tests its proposed learned shrinkage method in another dataset with exact cell-label matching.

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