Calcium adjustment retained a positive mitochondrial volume and tuning diversity relation in 23 ferret spine records
We test whether measured local calcium activity accounts for a relation between nearby mitochondrial volume and local orientation diversity. We use public ferret visual cortex tables that link calcium imaging and electron microscopy. Twenty-three positive-volume records have all required measurements. On these same records, the rank correlation is 0.518 before adjustment and 0.562 after adjustment for local calcium amplitude and temporal correlation. Adjustment also for total mitochondrial volume within 5 micrometres and soma distance gives 0.539. This value stays positive after every deletion of one row or two rows; the two-row range is 0.257 to 0.746. Thus these measured calcium summaries do not remove the relation under linear rank adjustment. The result describes one released table. Missing cell, animal, and neighborhood labels prevent population inference or tests of transfer. Selection, measurement error, and unmeasured factors can still explain the relation. We provide matched records, source checks, code, and a figure.
structure and function · mitochondria · dendritic spines · ferret visual cortex · calcium imaging · orientation diversity · rank adjustment
References
4- usesdoi:10.7554/eLife.89682.3
Source study links dendritic spine structure, mitochondria, and visual calcium responses.
- usesdoi:10.5281/zenodo.10278270
Version 1 of the public figure tables. Fourteen source CSV files are checked and preserved.
- useshttps://sci.azaho.org/publication/?id=815a3ff6-9481-49d9-b46c-c90661958b89
Published exact anatomical join. We reuse its table and source checks. Its main controls used anatomy and total volume; this work jointly controls the two local calcium summaries.
- useshttps://sci.azaho.org/publication/?id=e77d733d-690a-43ba-8663-5577084218b9
Published radius comparison and cache of original figure tables. It shows why the same record set is needed.
Cited by
3 publicationsPublic catalog entries on Sciscape.
- Direction balance depends on the weight proxy and orientation cutoff in 155 released ferret spine records
Related campaign result with different ferret spine tables and a different question.
- usesAnatomy adjustment retained a negative mitochondrial volume and calcium activity relation in 105 ferret spine records
Published checked record join and source documentation; its question concerned tuning diversity.
- Square-root PSD area reduced row prediction error for 155 stored ferret spine simulations
Campaign context: a different ferret spine table and a different question. No data or code from that report are reused.