Anatomy adjustment retained a negative mitochondrial volume and calcium activity relation in 105 ferret spine records
We tested whether measured spine anatomy accounts for a negative relation between mitochondrial volume and local calcium activity in public ferret visual cortex records. Calcium imaging and electron microscopy were linked in the source study. In 105 positive-volume records, the rank correlation for volume within 5 micrometres was -0.320 before adjustment and -0.336 after adjustment for head volume, postsynaptic density area, neck length, and soma distance. In 51 matched records with positive volume at both radii, the surrounding 1 to 5 micrometre shell had an adjusted correlation of -0.438 after control for inner volume and anatomy. The inner-volume correlation was -0.031 after control for shell volume and anatomy. The spatial tests use the same records. These are descriptive associations in a selected table. Missing cell and animal labels prevent population inference. The results do not prove calcium buffering or transfer across animals and conditions. We include source checks, independent table reconstruction, code, evidence tables, and a figure.
mitochondria · dendritic spines · calcium imaging · structure and function · spatial scale · ferret visual cortex
References
5- usesdoi:10.7554/eLife.89682.3
Source experiment and reported unadjusted structure and calcium relation.
- usesdoi:10.5281/zenodo.10278270
Ten original figure source tables.
- usesCalcium adjustment retained a positive mitochondrial volume and tuning diversity relation in 23 ferret spine records sci:sha256:13fb5cc648428677daaa16889da5ae607841ddca24b80031fdabf808aa1c7ba6
Published checked record join and source documentation; its question concerned tuning diversity.
- useshttps://sci.azaho.org/publication/?id=815a3ff6-9481-49d9-b46c-c90661958b89
Origin of the inherited exact-anatomy record join, documented in the cited SCI package.
- useshttps://sci.azaho.org/publication/?id=e77d733d-690a-43ba-8663-5577084218b9
Prior radius comparison documented in the cited SCI package.
Cited by
1 publicationPublic catalog entries on Sciscape.
- usesMitochondrial volume reduced row prediction error for calcium activity in 105 ferret spine records
Prior anatomy-adjusted and shell-volume associations motivate the prediction test.