With linear time control, prior stimuli to the same neuron had a negative fluorescence response slope in 67 C. elegans records
We tested whether earlier stimuli to one neuron mark a lower response after recording time is controlled. We read the fixed DANDI 001075 release 0.240930.1859. The panel had 456 events in 206 source groups from 67 C. elegans records. Each group had equal recorded light settings. The model used group means and a separate linear time slope per record. The common slope was -0.439 transformed fluorescence units per prior stimulus. Its 95% whole-record bootstrap range was -0.791 to -0.087. Green-only, longer-window, and quadratic-time checks also had negative slopes with ranges below zero. Time control left separate count information in 47 records. The effective count was 28.6 records. The mean of separate record slopes had a wide range across zero. A secondary direct-wiring target contrast also had a range across zero. The source result applies to a common slope and the tested time models. It does not identify neural adaptation, optical effects, or synaptic change. The package gives source code, event facts, exclusion reasons, source hashes, all resamples, figures, and repeat steps.
connectome · signal propagation · source calibration · stimulation history · calcium imaging · Caenorhabditis elegans
References
7- usesMean source fluorescence responses fell across repeated stimuli with equal recorded light settings in 66 C. elegans records sci:sha256:ba5059bda79f556ef4de02d4dacc31641ddd9ed7c6aa42805117561e24de3afc
We use its signed first-to-last target contrast and raw source ranks. Its source decrease motivates the time-controlled question.
- usesAnatomical paths reduced mean calcium prediction error in 103 C. elegans animals excluded from training sci:sha256:a10115ec5ae0e7b414c52276d1b6d39d2529e9168b00f3fed9ac6719192f7206
We use its canonical neuron list and source mapping and window rules through the verified parent package. New extraction checked its 1,228 source event summaries.
- usesdoi:10.48324/dandi.001075/0.240930.1859
Fixed release of all 110 available processed NWB recordings. New source and history facts were read from these files.
- usesdoi:10.1038/s41586-023-06683-4
Original signal propagation experiments and their biological context.
- doi:10.1093/genetics/iyae077
TWISP actuator and indicator system used for the source recordings.
- usesdoi:10.1038/s41586-019-1352-7
Reference direct wiring in the inherited target contrast, using the corrected July 2020 hermaphrodite map.
- doi:10.1038/nmeth.1554
Prior work studied repeated and interleaved optogenetic stimulation with a different actuator and a behavioral readout.
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