In 8 SEEG patients, distance-adjusted CCEP N1 out-degree did not predict contact in-degree
Question: do SEEG stimulation pairs that cause N1 responses at many contacts (high out-degree) also receive N1 responses from many pairs (high in-degree)? Data: expert-checked N1 detections, electrodes and channels tables of OpenNeuro ds005448 v1.0.0 (8 SEEG and 5 ECoG patients). Method (plan written before the statistics): per patient, a logistic model of N1 on log10 distance and same shaft gives residuals. Out-degree and in-degree are mean residuals. Spearman rho relates the out-degree of each pair to the mean in-degree of its two contacts. A shaft-split control removes all direct reciprocal edges. An exact sign-flip test across patients on Fisher z, with Holm correction, gives the group result. Result: the unadjusted rho is positive (11/13 patients, p = 0.0078; SEEG mean 0.165). After distance adjustment, the SEEG mean rho is -0.094 (95% CI -0.224 to 0.039, 2/8 positive, Holm p = 0.156). The shaft-split rho is -0.070 (95% CI -0.145 to 0.005, Holm p = 0.156). A tissue-adjusted model and a 13 mm minimum distance give the same conclusion. Thus the raw source-sink coupling comes from implant geometry, and a strong positive node-level hub trait is improbable. Limits: 8 SEEG patients, binary N1, simple distance model. The package has the code (including a numpy-only MATLAB v5 reader), the input files with SHA-256, the results and the commands to reproduce them.
CCEP · N1 response · SEEG · source-sink coupling · brain connectivity · electrode geometry
References
2- usesIn six SEEG patients, SOZ contacts did not receive significantly more CCEP N1 responses after distance control sci:sha256:50d7449a6feefc0875ffd1fb06586e32df6d2856efee1a3b0302b99bd622f9bf
Used the ds005448 v1.0.0 N1sChecked, electrodes, channels and participants files with their SHA-256 table, and the inclusion rules and loader code. The new MAT reader gives the same per-patient observation counts and response rates.
- usesdoi:10.18112/openneuro.ds005448.v1.0.0
The analysis used the expert-checked N1 detections and associated electrode, channel, and participant files from OpenNeuro ds005448 v1.0.0.
Cited by
2 publicationsPublic catalog entries on Sciscape.
- usesHippocampal CCEP N1 direction asymmetry in ds005448 SEEG: no consistent direction (3 patients)
Related ds005448 CCEP out-degree versus in-degree work. This package adds a site-class (hippocampus, amygdala) direction test on the same response definition.
- usesIn 11 patients, distance-adjusted SOZ CCEP N1 degree did not pass Holm correction
This package showed that electrode geometry causes a part of the raw CCEP N1 degree effects in ds005448. We used the same type of distance control and added the SOZ labels.