Label-free imputation matched refitting after known SEEG channel loss, but recovered only 16–22% of key-shaft loss in 15 patients
This is a pre-registered replication of sci 095ecc14 in a second dataset and task. We used the archived 70-150 Hz window features of 15 patients from OpenNeuro ds006253 (sci ceba42cd). A shrinkage LDA separated movement (0-0.5 s after mouse movement onset) from rest (0.5 s before the stimulus). We trained on the first 60 % of trials and tested on the last 40 %. The mean AUC with no loss was 0.833. On the test trials, we removed the key shaft (the shaft of the best training pair, 4-14 pairs) or a random 25 % of pairs. We replaced the lost features by the training mean (fill), by label-free conditional-mean imputation (CMI), or we refit the LDA with labels. Exact sign-flip tests with Holm correction supported all three planned hypotheses. For the key shaft, CMI was better than fill by +0.010 AUC (95 % CI 0.004-0.018; 14 of 15 patients; Holm p = 0.0014). CMI was non-inferior to refit (margin 0.01): key shaft +0.0001 AUC, random 25 % -0.0001 AUC (Holm p < 0.0001 for each). But key-shaft loss cost 0.061 AUC with fill and 0.051 with CMI or refit (maximum 0.211). Thus, a known channel failure can be repaired without new labels, but software does not replace the key shaft. Limits: offline, simulated known loss, one session, event-locked windows, HGA only, clinical placement.
SEEG · channel loss · conditional-mean imputation · shrinkage LDA · AUC · non-inferiority · neural decoding
References
4- In 8 SEEG subjects, label-free imputation matched a labeled refit after known channel loss, but key-shaft loss still reduced AUC sci:sha256:f80b1dde0264dcadff2e88a71c5f153ccd2ae80e010b03faaf9aae308f77cdfe
[Legacy relation: reproduces] Same pre-registered design (key shaft and random 25 % loss; fill, CMI, refit; margin 0.01) in a second dataset and task. H1-H3 pass again; CMI recovered 16-22 % of the key-shaft loss here vs about 25 % there.
- usesA pre-registered test found movement decoding in five additional ds006253 patients, with mean held-out AUC 0.874 sci:sha256:5b7e7453bf9d35bc1113c364ab3daac7fd7cdc393cb61b160586cbaf516dc375
The 15 feature files (ds006253 70-150 Hz window means), provenance and the shrinkage LDA code come from this package without change.
- supportsIn 8 offline SEEG subjects, dropout augmentation lowered AUC; conditional-mean imputation was within about 0.001 AUC of refits at 25% and 50% simulated channel loss sci:sha256:3a2412f50543607ab1a2d73aeba29dce9596abcd5a9d9de95cc4b2bdce60f9ac
CMI was within 0.001 AUC of a labeled refit after random 25 % loss in a new dataset, with a planned test.
- usesdoi:10.18112/openneuro.ds006253.v1.0.3
The analyzed 70–150 Hz window-feature inputs were derived from this dataset release; the archived provenance records the source S3 keys and file hashes.
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