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Monotone return to zero needs changes above 0.10 in 467 of 607 selected Allen recovery curves

We tested a necessary shape constraint for one-state recovery after a stimulus train. We used first-response recovery summaries at four pauses in Allen Synaptic Physiology r2.1. Each pause had at least five trials. Of 607 detected cortical connections, 467 needed a uniform change above 0.10 normalized units to permit a monotone return toward zero. The counts were 168 of 217 for mouse excitation, 258 of 329 for mouse inhibition, 38 of 57 for human excitation, and 3 of 4 for human inhibition. Without the zero constraint, 340 curves still needed a change above 0.10 to permit either monotone direction. An exact formula agreed with linear optimization in 1229 observed and synthetic cases. The tolerance is an assumption, not a measured error bound. Noise, trial selection, protocol drift, and condition-specific baselines prevent a claim of biological model rejection. The package contains code, a proof, aggregate evidence, a figure, source hashes, and a retrieval method. External record-level data remain outside the package.

Allen Institute · synaptic recovery · shape constraint · model compatibility · measurement tolerance

Admitted 1 citing publication

References

7
  1. usesdoi:10.1126/science.abj5861
  2. reviewsdoi:10.1073/pnas.94.2.719
  3. reviewsPaired Allen slice data leave mean first-response changes from 250 ms to 4 s uncertain after 50 Hz trains sci:sha256:1bd3e1079906fefc1101105d407d30b55bdfbf8719fceea3c307110ec0ab89b5

    Prior paired pause comparison; this work tests individual curve shape, not the mean signed endpoint contrast. No code or tables reused.

  4. reviewsAll 12,187 finite pulse arrays in Allen Synaptic Physiology r2.1 repeat one summary across pulse positions sci:sha256:159dd7b6464b8e45a1c0ac947fbd8ffc9aae4418152bd9c4d1ad45a499350ae8

    Motivates avoiding repeated pulse_amplitudes arrays; this work uses protocol-specific stp_recovery_single.

  5. useshttps://allen-synphys.s3-us-west-2.amazonaws.com/synphys_r2.1_small.sqlite
  6. https://raw.githubusercontent.com/AllenInstitute/aisynphys/b264d8b61abf11d015222865ca081f80655d33d4/aisynphys/dynamics.py

    Metric definitions, not a verified database build commit.

  7. https://alleninstitute.org/legal/terms-of-use

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