With equal leak and free cell gains, 25 Cook neuronal gap models failed to fit 218 C. elegans calcium means within 2.61 sample standard errors
We asked whether a passive electrical wiring model can fit positive calcium means when each cell has a free input gain and readout gain. We used 218 directed means from 109 selected C. elegans response pairs. A repeated free reciprocal fit allowed changes within 1.2410 sample standard errors. Four native gap exports had missing routes that set larger fit limits. We therefore added an exploratory test of the corrected July 2020 Cook matrix. We retained all 302 neuronal slots and all available neuronal gap weights. The static model used equal leak and 25 fixed gap scales from 0.001 to 1000. With recorded weights, its best scale needed a common band of 2.6174 sample standard errors. All 25 scales failed at 2.61. Separate graph and linear-program checks agreed, and we preserve a failed-cycle certificate for each scale. One-per-link and square-root weights needed 2.6535 and 2.6726. Retaining all 469 named cells in the worksheet gave 2.6706 with recorded weights. A matched exploratory sample of 118 means had routes in all five maps; its best recorded-weight bands ranged from 1.5287 to 2.2290, against a reciprocal band of 1.2410. These are deterministic sensitivity sets, not confidence intervals across animals. The export lacks animal and event identifiers. The result limits the stated static models and does not identify a biological cause. The package preserves original code, selected response facts, complete retained graphs, fitted means, failure certificates, figures, source hashes and repeat instructions.
connectome · C. elegans · electrical synapse · passive network · cell gain · signal propagation · difference constraints · sensitivity analysis
References
7- usesWith free cell gains, changes within 1.25 sample standard errors allowed a reciprocal fit to 109 selected C. elegans response pairs sci:sha256:cd8e2262408cdd13ad3f6faa138f2b822a795ac9f993a1571ead9954cd16076a
We reuse its exact selected response facts and native edge facts. We test the stronger wiring-model constraint that its reciprocal analysis left open.
- usesNeuron wiring profiles reduced ridge prediction error by 5.44% in a fixed test of 6,270 C. elegans atlas responses sci:sha256:82205b10c90963e96ba501cad1ac1abbfd2de6ce626ff95dc6c2fbf361413e21
We use its complete five-map neuronal graph facts and source provenance. An independent source reader checks every electrical matrix used here.
- usesdoi:10.1038/s41586-023-06683-4
The selected optogenetic calcium response means come from this signal propagation atlas through the pinned WormNeuroAtlas export.
- usesdoi:10.17605/OSF.IO/E2SYT
This is the original public data record for the functional atlas. The exact used export version and hashes are preserved.
- usesdoi:10.1038/s41586-019-1352-7
We use the corrected July 2020 hermaphrodite symmetric gap matrix. The main model has all 302 neuronal slots; a control has all 469 named cells.
- usesdoi:10.1098/rstb.1986.0056
Two native White anatomical exports supply full retained neuronal gap graphs for comparison.
- usesdoi:10.1038/s41586-021-03778-8
The native exports for adult maps 7 and 8 supply retained neuronal gap graphs for comparison.
Cited by
2 publicationsPublic catalog entries on Sciscape.
- usesWith twofold leak bounds and gain 0.001–1000, the Cook gap model could not fit 218 C. elegans means within 1.50 sample SEM
We use its verified full Cook neuronal graph and exact selected response facts. We extend its equal-leak finite-grid check to bounded unequal leaks over a continuous scale range.
- Magnitude reciprocity required a factor of 2.05 at 1 per second in 106 fitted C. elegans kernel pairs
This prior test uses fixed gap conductance models and scalar gains. The present necessary condition permits arbitrary reciprocal transfer and cell-specific time filters.