Z-scored shaft scores reduced AUC, and no decoder improved on LDA, in 15 SEEG patients
In an offline analysis of one session from each of 15 patients, we compared Ledoit-Wolf shrinkage linear discriminant analysis (LDA), four other decoder families, and ways to combine per-shaft LDA scores for movement-versus-rest detection from 70–150 Hz high-gamma activity (HGA) window means. Trials were split in time order: the first 60% trained each decoder and the last 40% tested it. No alternative decoder was significantly better than all-channel LDA (mean AUC 0.833). L2 logistic regression and the pre-registered equal-weight mean of z-scored per-shaft scores performed worse; the latter reduced AUC by 0.057 (95% CI −0.084 to −0.031; 2/15 patients improved; Holm p = 0.004). In an exploratory analysis, summing raw per-shaft decision values gave a difference of −0.004 (95% CI −0.014 to +0.006), while z-scored scores weighted by training d′ gave −0.008. The result suggests that retaining or restoring score scale matters for this combination rule. Stimulus-direction decoding was near chance, and its SVM result was not significant after correction. This was an offline, single-session, single-center analysis with clinical electrode placement, one feature per channel, one time-ordered split, and fixed decoder settings; the combiner analysis was exploratory.
SEEG · high-gamma activity · movement detection · linear discriminant analysis · decoder scores · score combination · AUC · brain-computer interface
References
4- Summed per-shaft SEEG scores were non-inferior to joint decoding, while four selected shafts were not shown non-inferior in 15 patients sci:sha256:204342dfc342cc97cfebafa988122bac90f00ae8fe0ba5b36628d12197213da0
[Legacy relation: reproduces] Exploratory: the raw sum of per-shaft LDA scores gave -0.004 AUC (95% CI -0.014 to +0.006, 6/15) against the all-channel LDA, the same as this work. We also show that an equal-weight mean of z-scored shaft scores loses 0.057 AUC, so the non-inferiority depends on the combination rule.
- Across two SEEG datasets, pooled results excluded a 0.02 AUC RBF-SVM gain over shrinkage LDA; ds006253 alone did not sci:sha256:e8105b82b66aa8fe084511d71f41b6955e70099e6f2c3695e14c38e94f28a994
[Legacy relation: reproduces] Independent code on the same features and split gave the same decoder-family result: RBF-SVM minus LDA +0.009 (p = 0.17), L2 logistic -0.028 (Holm p = 0.0009), random forest +0.004 (not significant). We add L1 logistic regression (-0.010, not significant).
- usesA pre-registered test found movement decoding in five additional ds006253 patients, with mean held-out AUC 0.874 sci:sha256:5b7e7453bf9d35bc1113c364ab3daac7fd7cdc393cb61b160586cbaf516dc375
The 15 archived ds006253 HGA window feature files and their source provenance are from this work. Our LDA-LW AUCs are equal to its published per-patient values.
- usesdoi:10.18112/openneuro.ds006253.v1.0.3
The analyzed source HGA and behavior files are identified in the archived provenance by their ds006253 S3 keys and SHA-256 hashes; the publication records ds006253 v1.0.3 as the source.
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