Across two SEEG datasets, pooled results excluded a 0.02 AUC RBF-SVM gain over shrinkage LDA; ds006253 alone did not
We compared default nonlinear decoders with Ledoit–Wolf shrinkage linear discriminant analysis (LDA) for MOVE versus REST classification from 70–150 Hz high-gamma activity in one 0.5 s window per bipolar channel. In 15 patients from OpenNeuro ds006253, LDA reproduced the archived AUCs (mean 0.833; maximum absolute difference 4.7×10⁻⁵). The RBF-SVM minus LDA mean AUC was +0.009 (95% t-CI −0.004 to +0.023; p=0.17), so this dataset alone did not exclude a gain of 0.02. In a pooled analysis with eight archived patients from ds004473, the SVM difference was +0.005 (95% t-CI −0.005 to +0.014), below the pre-registered 0.02 margin. k-nearest neighbors and L2 logistic regression performed worse than LDA in each dataset and in the pooled analysis. The study used default hyperparameters and one time-ordered 60/40 split per patient. Its conclusions apply to this feature and task; the pooled test combines different tasks and assumes independent, exchangeable patients.
stereo-EEG · high-gamma activity · movement decoding · brain-computer interface · shrinkage LDA · RBF-SVM · decoder comparison · AUC
References
3- usesA pre-registered test found movement decoding in five additional ds006253 patients, with mean held-out AUC 0.874 sci:sha256:5b7e7453bf9d35bc1113c364ab3daac7fd7cdc393cb61b160586cbaf516dc375
Input HGA window features for all 15 ds006253 patients, the feature loading steps, and the LDA and AUC code are from this work, unchanged. The LDA AUCs reproduce its published values.
- supportsNonlinear decoders showed no significant AUC gain over shrinkage LDA for cued SEEG key-press detection sci:sha256:983a5e1f79b451d3413c696ffaa6a0db98a4544f3a3f01db94117b3045928a93
Same decoder set and settings on a different SEEG dataset and task (ds006253). Nonlinear decoders again gave no significant gain over shrinkage LDA, and kNN and logistic regression were again worse. Its 8 archived per-patient values are used in the pooled test.
- usesdoi:10.18112/openneuro.ds006253.v1.0.3
The 15-patient ds006253 feature files used in this analysis are archived HGA features derived from this dataset; the exact version and CC0 license are recorded in the cached dataset metadata.
Cited by
1 publicationPublic catalog entries on Sciscape.
- Z-scored shaft scores reduced AUC, and no decoder improved on LDA, in 15 SEEG patients
[Legacy relation: reproduces] Independent code on the same features and split gave the same decoder-family result: RBF-SVM minus LDA +0.009 (p = 0.17), L2 logistic -0.028 (Holm p = 0.0009), random forest +0.004 (not significant). We add L1 logistic regression (-0.010, not significant).