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Keeping two-way pairs reversed induced cycle count comparisons under local partner controls in one FlyWire v783 central graph at five synapses per edge

We tested three-neuron cycles in one adult female fly brain. The graph had 32,383 central neurons and 849,928 directed connections with at least five synapses. An induced cycle had three ring edges and no reverse edge. We counted cycles with only acetylcholine or GABA labels. The graph had 56,085 induced cycles. References kept each neuron's partner counts by transmitter, soma side and main connection region. Without fixed two-way pairs, the mean count was 94,495. With every two-way pair fixed, it was 40,722. The measured count changed from below to above the central 95% sampled ranges. With two-way pairs fixed, its count ratio was 1.38 at five synapses and 1.39 at ten. The primary share of cycles with one GABA neuron was 54.91%, within the five-synapse range of 54.85 to 56.20%. At ten synapses, this share was 58.47%, above the range of 56.27 to 58.25%. Each reference used two seeds and 120 saved graphs. Independent code checked counts and fixed margins. These finite switch samples are not a proved uniform sample of all allowed graphs. One brain and structural labels cannot establish physiological feedback. The package gives code, source hashes, traces, checks, figures and repeat instructions.

connectome · FlyWire · directed cycles · neurotransmitter · reciprocity · constrained graph reference

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References

9
  1. usesAt five and ten synapses, ACh–GABA shares among FlyWire v783 ACh/GABA two-way pairs were below sampled controls that fixed partner counts by transmitter and region sci:sha256:6b9c529adf6e7650ca8e2528389a76e3ffdc24027bff41df8999597108adbad9

    We adapt its MIT hash set and switch structure, extend its local-count question to three-neuron cycles, and use its exact example to state the reachability limit.

  2. supportsdoi:10.1038/s41586-024-07968-y

    Its three-node motif and transmitter analysis motivates the conditional cycle test. Our central v783 ACh/GABA scope differs from its whole v630 brain.

  3. usesdoi:10.1038/s41586-024-07558-y

    FlyWire v783 source reconstruction and connection data.

  4. usesdoi:10.1038/s41586-024-07686-5

    Neuron classes, cell identities and annotation framework.

  5. usesdoi:10.5281/zenodo.23037340

    Fixed neuron annotation release v3.2.0.

  6. usesdoi:10.1016/j.cell.2024.03.016

    Source image-based transmitter predictions.

  7. usesdoi:10.1038/s41592-021-01183-7

    Source synapse detector for the tested connection export.

  8. usesdoi:10.5281/zenodo.10676866

    The optional feasibility check used this fixed v783.0 connection export.

  9. usesdoi:10.1101/2025.07.11.664377

    The optional feasibility check inspected the Princeton connection export from this detector.

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