Shared neuron terms gave no clear delay prediction gain in a fixed completion test of 1,529 mouse cortical connections
We tested whether delays on other connections of one neuron help predict a hidden connection delay. We read all 123,506 directed pair records in Allen Synaptic Physiology r2.1. The primary sample had 1,529 mouse cortical connections from 560 donor groups. Global fitting and model choice excluded each test donor. Other eligible delays in its recording served as calibration. A ridge reference used cell labels, distance, depth, and recording conditions. Local covariance terms represented the same experiment, source, and target. Adding source and target terms to the experiment rule reduced mean squared error from 0.272546 to 0.271057 ms squared. The decrease was 0.547%, with a conditional 95% donor resampling range of -0.574% to +1.556%. Planned checks in milliseconds also had ranges that included zero. A natural log delay check gave a 1.300% decrease, with a range of +0.012% to +2.495%. A separate 143-connection human sample gave no clear gain. We reconstructed all 2,665 finite source delays from accepted average fits. Direct masked solves checked every primary prediction. A full source repeat matched predictions, losses, and model choices. The package preserves new code, all results, figures, source provenance, a completion tool, a reader for the complete recording graphs, and repeat steps. Original source data remain external. These selected slice circuits are not complete anatomical connectomes. The results limit this additive completion model and do not establish independent delays or a causal source effect.
synaptic delay · cortical microcircuits · multipatch · connectome models · delay completion · mouse cortex · shared source · shared target
References
4- usesdoi:10.1126/science.abj5861
We use the complete Allen Synaptic Physiology r2.1 pair scope and its fitted onset delays.
- Mouse cortical connections with a shared source had 23% smaller squared initial 50 Hz response differences under session and class controls; the donor range included no reduction sci:sha256:bb7d5b18d751c3c6c10ff4d569247ed7d1121c0236a8b633612001cf6249fe9e
This prior SCI study tested shared source and target effects on short-term response changes in the same release. It motivated the recording control. We test delay completion and do not reuse its code.
- doi:10.1016/j.neuron.2007.10.037
This experiment links release probability to synaptic latency and motivates a test of shared neuron effects.
- doi:10.1113/jphysiol.2010.199653
This experiment shows that presynaptic spike waveform can alter synaptic latency.
Cited by
1 publicationPublic catalog entries on Sciscape.
- supportsWith a 0.5 ms relay delay, fitted synaptic delays permitted earlier inhibition in three of 25 mouse V1 triplets
This prior analysis audited the same delay fields and tested prediction from shared cells. We independently reconstruct delays and ask about measured route timing in complete triplets.