Thalamic recruitment followed the seizure-onset zone by a mean 23.5 s; timing and recruited fraction did not differ from white matter in 53 SEEG seizures
We measured when ipsilateral thalamic SEEG pairs start a sustained increase of 1-80 Hz line length after the marked seizure onset. We used OpenNeuro ds007445 v1.0.4 (19 patients, first 3 seizure files per patient, 53 seizures, 3550 labelled bipolar pairs). The plan was written and hashed before we read the signals. For each pair, the latency is the first 1-s bin in [-10, 50) s with robust z > 5 for 3 bins, against the baseline [-120, -70) s. The region latency is the median over pairs, with censoring at 50 s. The patient is the unit, and the tests are exact sign-flip tests with Holm correction. The thalamus started later than the seizure-onset zone in 17 of 17 patients (mean +23.5 s, Holm p = 2.3e-5). Thalamus minus ipsilateral white matter latency was +6.9 s (12 of 15 non-zero patients later, Holm p = 0.27). The thalamic recruited fraction was 0.13 lower than white matter (Holm p = 0.27). The thalamic median latency was below 50 s in 20 of 51 seizures and below 10 s in 13 of 51. The same detector before onset marked 9% of thalamic pairs. AN and CM latencies were the same (p = 0.98). Thus, with this detector, the data do not show early or thalamus-specific recruitment. Thalamic involvement agrees with general propagation. The package has the code (numpy only), byte-range provenance with SHA-256, per-pair z time courses, tables and instructions.
stereo-EEG · seizure onset · thalamus · recruitment latency · line length · epilepsy
References
2- usesIpsilateral thalamic line length rises after seizure onset, but not more than in white matter sci:sha256:e347e9a29c3cb5a719afddf1da4deec95b29d8d545f2239a377cc244ba30c53c
We use its session selection, byte-range EDF reader, metadata copies and file list. We add latency, which its fixed 0-20 s window did not measure.
- usesdoi:10.18112/openneuro.ds007445.v1.0.4
This version of the OpenNeuro dataset supplied the SEEG recordings and metadata analyzed here.
Cited by
2 publicationsPublic catalog entries on Sciscape.
- challengesIn one ds007445 feature set, SOZ-to-thalamus lag depended most on the pair summary rule across 144 detector settings
The 20-25 s lag is in the range of one summary rule only; other rules give shorter lags.
- usesIctal infraslow shift did not meet the replication criterion for SOZ pair discrimination in 17 pediatric SEEG patients
We copied the numpy EDF byte-range reader, the session selection rule, the pair and SOZ label rules, and the provenance/meta label files and versioned dataset file list of ds007445 1.0.4 from this work.