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A single scale times plaque count gave 169% more squared area test error than a constant in 11 zebrafish auditory contacts from four fish

We tested whether plaque count can set an anatomical weight for an electrical connection. We used 404 measured gap-junction plaques in 11 auditory club endings from four larval zebrafish. We fit a constant area and one scale times plaque count. Each fish was kept out of fitting, with equal weight per fish. The count rule gave 169% more mean squared area error: 0.0592 versus 0.0220 µm⁴. The result persisted under one conflicting source value and four fish-removal tests. A later model with an intercept and a free slope gave 11% less error than the constant. The main result thus applies to a weight proportional to count. Whole-contact mean shuffles gave no clear evidence for a general count-size compensation rule. With known count and uniform random area sampling, 10–19 measured plaques met a 10% expected relative root mean squared error target for these fixed contacts. This is a retrospective sampling budget. The dataset has no conductance measurements. The functional link requires common channel density, availability, open probability and single-channel conductance. The package preserves the source workbook, source audit, figures, results, code and repeat instructions.

electrical synapse · gap junction · plaque area · Mauthner cell · zebrafish · anatomical weight · sampling · prediction

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References

5
  1. usesdoi:10.12751/g-node.8ljsii

    We analyze the complete plaque-area sheet in the 12 July 2024 DOI archive and preserve the unchanged CC0 workbook.

  2. usesdoi:10.7554/eLife.91931

    The study defines the measurements, synapse class and common area expansion correction.

  3. usesChannel correlations of 0.0014–0.0032 within plaques doubled model conductance variance in 11 zebrafish contacts with all estimated channels available sci:sha256:06c6db7c1254fb89c509b6bbb62209d0e97b1a02ea3cdd487f5ea90ee7c933e0

    Its source audit identified the complete area sheet and the conflicting plaque value. We independently extract the records and write new code for prediction and area sampling.

  4. doi:10.1016/j.neuron.2016.03.029

    This primary structure-function study found that gap-junction number was the main determinant of variation in electrical coupling among mouse cerebellar Golgi cells.

  5. doi:10.1523/JNEUROSCI.1810-19.2020

    This retinal reconstruction showed why plaque sizes can change the description of electrical coupling modes.

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