With neuron totals fixed, an early wiring model gave a higher forward synapse fraction than each of two adult C. elegans maps
We tested whether the rise in the forward chemical synapse fraction across eight C. elegans brain maps exceeds a model with early pair affinities and each animal's neuron input and output totals. The main panel had 162 embryonic brain neurons. We used the class order sensory, modulatory, interneuron, motor. Three early maps selected a uniform mixture of 0.1 by omitted-map validation. The mean recorded forward fraction rose from 49.07% in the early maps to 55.39% in two adults. The fitted adult mean was 56.64%. The recorded adult mean was 1.26 percentage points below the model. A central 95% range from 1,000 complete-site resamples was -1.88 to -0.67 points. This range concerns the same maps, not a population of worms. Smoothing, early reference, neuron panel, label, and birth contact checks kept a negative residual. Flow bounds showed that the totals did not force the forward fraction. We also give the identity that fixes mean rank displacement at fixed totals. Adult neuron totals are inputs to the fit, so this is not a forecast from early wiring alone. The result limits inference from the global forward fraction; it does not exclude changes at specific connections. The package preserves code, source hashes, fitted matrices, tables, figures, resample results, integer optimization certificates, and repeat steps.
connectome development · Caenorhabditis elegans · feedforward wiring · neuron totals · iterative proportional fitting · synapse counts
References
3- usesdoi:10.1038/s41586-021-03778-8
We use eight chemical synapse maps, neuron metadata, count matrices, and the birth contact table. We test the interpretation of the global forward fraction after neuron totals are fixed.
- usesdoi:10.1214/aop/1176996454
Relative entropy projection gives the matrix fit under row and column constraints.
- Feedforward triad counts without reverse edges were within contact area control ranges in seven C. elegans maps at a cutoff of one synapse sci:sha256:23bc4cffbc09ef6735c01947c2b69570c66ef530ea1470aee89e9d5782379a9e
This prior SCI study tests feedforward triad counts in the same maps under graph controls. Our question concerns broad-class synapse fractions across development.
Cited by
1 publicationPublic catalog entries on Sciscape.
- usesAt fixed neuron totals, early directions cut adult count deviance by 2.4–4.6% in two C. elegans maps with matched contact smoothing
We extend its early-affinity and fixed-neuron-total comparison to detailed count allocation, matched symmetric templates, and an error decomposition. All analysis code is new.