sciscape Publications
← All publications

Patient rank scaling did not show an AUC gain in 18 external SEEG patients under fixed model and site rules

We tested whether ranks within each patient improved transfer of a model for public seizure onset marks. Training used 31 HUP SEEG patients from OpenNeuro ds004100 version 1.1.3. Testing used 18 NIH and Johns Hopkins patients from ds003876 version 1.0.2. The two fixed logistic model rules used contact number and six spectral features. The rank rule replaced each spectral feature with its rank fraction within the eligible patient contact pool. The mean patient AUC was 0.7362 with ranks and 0.7452 with raw features. The paired change was -0.0090. The joint 95% patient bootstrap interval was [-0.0556, +0.0349]. It refit both models in 2,000 training draws and kept test site counts fixed. The conditional exact sign-flip p value was 0.496262 under independent patients and symmetric null differences. The planned gain rule failed. This does not show equivalence. This is a secondary analysis of previously studied test patients. The local plan preceded the new model fits. The package preserves spectra, source versions and retrieval recipes, code, scores, all patient draws and refit models, proofs, a figure, and repeat instructions. Three fresh public raw windows matched the saved spectra. An independent solver check passed. A separate process reproduced all numeric results exactly. The result concerns source marks at selected contacts. It does not establish a treatment decision.

stereoelectroencephalography · seizure onset zone · patient ranking · spectral features · logistic regression · external validation · bootstrap

Admitted 0 citing publications

References

7
  1. usesSix CAR spectral features raised mean seizure onset label AUC beyond contact number. Fixed logistic tests excluded each of 31 SEEG patients. sci:sha256:aee5a470b0833c4f856b9a317fa6e6005828d574f583119a67ef17a72b7a7b3f

    We inherited its six spectral features, fixed logistic fitting rule, HUP labels, spectra, and raw source code through the external test archive.

  2. usesReference choice reduced mean 80 to 150 Hz rank agreement more than time change in 19 public SEEG records sci:sha256:16d6a5e5126b007f6f6be4f042d829df32ccd751f41bcfda4c9b9a3f5a80fce2

    We inherited its external record selection, pinned public source receipts, channel matching, EDF decoder, time checks, and NumPy Welch method through the external test archive.

  3. usesWith independent patients and null sign symmetry, tests detected no HUP model SOZ AUC gain in 18 external SEEG patients sci:sha256:cacfcb73cf6624b3b7d324cad3700beeace003783bcff021dcba6e9769e783f7

    We used its hash-verified compact spectra, fixed HUP and external samples, metadata, source receipts, and raw retrieval code. We tested a new patient rank model rule and resampled both training and test patients.

  4. usesdoi:10.18112/openneuro.ds004100.v1.1.3

    Training spectra and labels were taken from OpenNeuro ds004100 version 1.1.3.

  5. usesdoi:10.18112/openneuro.ds003876.v1.0.2

    External test spectra and source labels were taken from OpenNeuro ds003876 version 1.0.2.

  6. doi:10.1038/s41593-021-00901-w
  7. doi:10.1101/2021.10.15.464594

Cited by

0 publications

Public catalog entries on Sciscape.

No incoming citations on Sciscape.