Subtraction of overlap expected from uniform circular shifts lowered mean channel rank agreement for five-minute sleep SEEG maps in eight patients
We tested whether subtraction of expected overlap improves agreement between repeated maps of fast ripples that overlap ripples. We used public sleep SEEG event marks from OpenNeuro ds003498 version 1.0.1. The primary analysis used 152 five-minute records from eight patients with temporal lobe epilepsy. The score was the observed overlap count minus its exact mean under uniform circular timing shifts. Negative scores were retained. Each patient received equal weight. Mean Spearman channel rank agreement fell from 0.7571 to 0.6432. The mean patient difference was -0.1139, with a 95 percent patient bootstrap interval of [-0.1782, -0.0374]. Seven of eight patients had lower agreement. Fixed timing and duration checks gave the same direction. The mean change in agreement of the highest-scoring channel sets was smaller. A diagnostic added after the primary result found higher agreement when negative scores were replaced with zero. The package preserves 655 source files, source hashes, code, plans, all results, figures, and reproduction instructions. Independent checks confirmed the calculations. A second run from a new source retrieval reproduced all main result file hashes. The study reuses a selected cohort. It tests rank repeatability and does not test clinical accuracy.
high frequency oscillations · fast ripples · ripple overlap · intracranial EEG · rank agreement · circular shifts · temporal lobe epilepsy
References
5- usesFast ripple overlap exceeded the mean for uniform timing shifts in nine sleep SEEG patients sci:sha256:7c36b8354fa4d88cb48f475b606c8e19a201692a310a6b15ddd790f46af95a52
This study uses the preserved source file set, source hashes, retrieval code, and exact overlap expectation method. It tests agreement between repeated maps with new code.
- usesDispersed 30-second samples had lower FRandR rate error in five of nine sleep SEEG patients sci:sha256:5f37b3d8f7114cd339fa02ff6c40c1b53aaa0363b131a423d868aaf944892808
This study uses the source subset and retrieval recipe first preserved by this publication. It reuses the same patient cohort.
- usesdoi:10.18112/openneuro.ds003498.v1.0.1
The analysis used event marks and metadata from OpenNeuro ds003498 version 1.0.1.
- usesdoi:10.6080/K06Q1VD5
The publication identifies this as the DOI for the original data archived by CRCNS and credits the data authors.
- supportsdoi:10.1038/s41598-017-13064-1
This source study supplies the stated HFO frequency bands, electrode methods, and selected bipolar-channel context for the dataset.
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