Larger initial spines had more visual calcium tuning energy but no clear five-day stability gain in 13 mice, assuming independent repeat errors
We tested whether initial optical spine area separates later visual tuning stability among retained spines. We used 795 five-day binocular response records from 22 neurons in 13 mice in Figshare 28738592 version 1. Small and large groups were split within each imaged field at the initial area median. Distinct-repeat products estimated tuning energy and squared change under independent repeat errors. Mice had equal weight in the component means. The large group had 3.061 times the mean endpoint tuning energy of the small group, with a 95% mouse bootstrap interval of 1.655 to 5.453. It also had more change energy. The primary ratio of change energy to endpoint energy was 0.600 in small spines and 0.546 in large spines. The large-minus-small difference was -0.054, with an interval of -0.393 to 0.286. Removing one mouse could change its sign. Planned trial and scale checks kept the overall difference uncertain. An added comparison in the same eight mice and 14 cells did not establish an age difference. The data support more measured tuning signal in larger initial spines, but do not establish greater overall stability. Unknown optical calibration, shared errors, retention selection and one small animal sample limit inference. Original source rebuilding, independent arithmetic checks, simulations and a clean offline repeat passed. The package includes code, compact data, source hashes, all results, figures and repeat steps.
dendritic spine · structure and function · visual cortex · calcium imaging · tuning stability · measurement noise · longitudinal data
References
7- usesdoi:10.1038/s41467-025-60825-y
Source study for tracked structural and functional spine measurements.
- usesdoi:10.6084/m9.figshare.28738592.v1
Fixed version of the original tracked-spine source file. Source hash and source-reading code are preserved.
- usesReported spine area growth had a positive relation to noise-scaled visual calcium change within fields in 13 mice sci:sha256:45ecbb070115a65cacb321d583a152640b5271b3aefaccfb081cdd4eb196c5cc
We reuse its compact retained-spine arrays, reported areas and source extractor. SCI verification and an original source rebuild gave exact byte matches.
- usesInitial 2–5 µm neighbor links gave no clear extra agreement in five-day binocular tuning changes of retained spines in nine mice sci:sha256:93e2a297312c83411a00c531887556103d3f3205054bbdd94206d656b63f69a9
We build on its application of distinct-repeat products to five-day spine tuning changes. We test initial size groups and relative change, rather than shared local changes.
- usesdoi:10.1016/j.neuroimage.2015.12.012
Prior method for unbiased pattern change estimates from independent data products. We do not claim this general principle is new.
- doi:10.1038/nature02617
Prior experimental link between initial spine size and structural plasticity in hippocampal slices.
- doi:10.1016/j.neuron.2005.03.015
Prior experimental evidence that spine geometry affects calcium signals; this limits current and strength interpretations.
Cited by
3 publicationsPublic catalog entries on Sciscape.
- Retained spines with larger optical area had a 0.020 higher visual tuning repeat score in 13 mice when all distinct repeat pairs were used
This prior study tests optical size against tuning change across dates. We test repeatability within dates and give an optical error counterexample.
- supportsWith three to five training repeats per direction, separate date curves raised calcium test error by 10.1% in 1,430 retained spine records from 13 mice
Prior study linked initial optical area to tuning energy and tested later stability. We separate gain and mean changes from tuning shape.
- usesUsing source trial flags reduced the slope between reported spine area change and calcium variance change by 55% in a linear test of 654 records from 12 mice
We reused its signed compact retained-spine input arrays and MIT extraction code. A rebuild from the original source matched every row and array.