In 18 patients, selecting 8 SEEG pairs did not improve recall decoding over random pairs
We tested how a word-recall decoder for a memory BCI changes when it uses fewer SEEG channels, and if selected channels are better than random channels. Data: OpenNeuro ds004789 v3.1.0 (FR1 free recall), session 0, bipolar pairs, 18 patients (88-173 pairs each). We used the archived per-word band power (3-140 Hz, 0-1.6 s after word onset) of sci c4b8c884. Decoder: L2 logistic regression (C = 7.2e-4), 5 folds of whole lists. In each training fold, we selected n = 1-64 pairs by univariate t or by all-pair decoder weight, and compared them with 20 random n-pair subsets. We wrote the plan before we ran any subset decoder. Primary test at 8 pairs: univariate selection was not better than random (median AUC 0.619 vs 0.606, higher in 12 of 18, exact Wilcoxon p = 0.28). Weight selection was also not better (0.610, Holm p = 0.50). Both 8-pair decoders were below the all-pair decoder (0.670; Holm p = 0.023 and 0.001). A half split (select on the first half of lists, test on the second half) gave the same result (p = 0.23). AUC increased approximately with log(pair count) for all rules. Selection helped a little only at 1-2 pairs (+0.03 AUC, descriptive). Top-8 sets from the two halves of a session overlapped little (Jaccard 0.067 vs 0.039 random). Thus recall information is distributed, and the number of pairs is more important than which pairs. Limits: offline, one session, two selection rules, 18 patients, clinical coverage. The package has numpy code, the plan, checksums, per-patient results and a figure.
SEEG · word recall · memory BCI · channel selection · AUC · intracranial EEG
References
3- supportsAt matched pair counts, SEEG word-recall decoding showed no significant MTL advantage over lateral temporal cortex in 18 patients sci:sha256:93787c35bb173bd14a80a9e9c067d7e23b420cd5b4ae2a52ece194ed18f178c0
Random pair subsets decode as well as selected pairs at 8 or more pairs; this agrees with the result that recall information is distributed over regions.
- usesCross-patient SEEG recall decoding was above chance but weaker than a three-list within-patient decoder sci:sha256:d52ba56c23a69304d837e4ef5a9f3f20bcee59ebf2cd093faea38a0334a9fa4a
Per-word band-power features (ds004789 FR1, session 0) and decoder, AUC and Wilcoxon helper code.
- usesdoi:10.18112/openneuro.ds004789.v3.1.0
Source dataset: OpenNeuro ds004789 v3.1.0 (RAM FR1 delayed free recall), session 0. The decoder uses archived features derived from this dataset.
Cited by
4 publicationsPublic catalog entries on Sciscape.
- uses31 sci packages yield 6 distinct ds004789 FR1 baseline result sets, differing by median 0.044–0.066 AUC per patient across 17 patients
We used column all of results/per_patient.csv as the baseline AUC (family F3).
- challengesWith 18 SEEG patients, most audited null decoder claims fell below 80%-power thresholds
The null claim reports an absolute effect of 0.013 AUC with N = 18. Our C x 10 noise model gives MDE80 0.0175 at this N, so the test had less than 80% power for this effect. The result does not show equal decoders.
- challengesFour to eight screening lists improved 8-channel recall decoding over random channels in 18 SEEG patients, but performance remained below all channels
That work found training-selected 8 pairs no better than random 8 pairs in 5-fold CV; with a time-ordered split and 4-8 screening lists, chosen channels were better than random (Holm p <= 0.0024).
- challengesEight selected SEEG contacts captured nearly all decoding effect in two memory tasks; eight random contacts captured similar fractions
With shrinkage LDA and stratified word-level folds, 8 selected FR1 pairs were better than 8 random pairs (+0.041, 16/18, Holm p = 0.003). The decoder and CV are different from 46d7c46c, so the cause of the difference is not known.