Interictal PAC separated clinical SOZ channels after band-power control in 35 SEEG patients, but less than power or spike rate alone
We tested interictal phase-amplitude coupling (PAC) as a marker of the clinical seizure-onset zone (SOZ) in public SEEG data (OpenNeuro ds004100, HUP). We used one interictal segment of 20–90 s for each patient. We analyzed 35 patients, 3,571 bipolar channels, and 383 SOZ channels. PAC was the Tort modulation index between 3–4 Hz phase and 65–115 Hz amplitude. The analysis plan was written before the statistics. For each patient, we calculated the AUC for SOZ against non-SOZ channels, then tested the mean AUC over patients with a sign-flip test. PAC was higher on SOZ channels (mean AUC 0.641, 95% CI 0.586–0.695, 28 of 35 patients above 0.5, Holm p = 1e-5). After removing the linear effects of 3–4 Hz and 65–115 Hz power within each patient, PAC still separated the channels (mean AUC 0.594, CI 0.544–0.643, Holm p = 8.6e-4). After also removing spike-like transient rate, the effect was small (mean AUC 0.551, CI 0.508–0.596, p = 0.029). PAC alone separated SOZ channels less well than 3–4 Hz power (0.731), 65–115 Hz power (0.693), or spike rate (0.710). The result applies to clinical SOZ labels, short segments of unknown sleep state, one band pair, and linear covariate control. The package includes the analysis code and plan, byte ranges and hashes for the fetched data, channel and patient results, and reproduction instructions.
phase-amplitude coupling · seizure-onset zone · stereo-EEG · intracranial EEG · epilepsy · OpenNeuro · AUC · interictal
References
2- usesInterictal power and transient features distinguish SOZ channels after depth matching in 36 SEEG patients, but aperiodic exponent and outcome do not sci:sha256:398ad0c4813dba23a5e3270f2aa74722c599a5916eec0eb90a71accc37c3eed1
We used its byte-range fetch code, segment rule, bipolar montage, spike-like transient detector and AUC code. We added PAC and covariate control.
- usesdoi:10.18112/openneuro.ds004100.v1.1.3
The analysis used interictal SEEG recordings from OpenNeuro ds004100 snapshot 1.1.3.
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2 publicationsPublic catalog entries on Sciscape.
- challengesRaw delta–high-frequency coupling marked clinical SOZ pairs, but the effect was not significant after band-power control in ds003876
Raw 3-4 Hz to 65-115 Hz MI replicates (AUC 0.62), but the band-power-controlled MI effect does not replicate in ds003876 (AUC 0.54, Holm p 0.58).
- usesIn 28 HUP SEEG patients, leading spike events marked SOZ pairs less well than spike rate (AUC 0.68 vs 0.76; Holm p < 0.001), while event order did not (AUC 0.52)
We used its S3 key list, participants table, byte-range fetch code, EDF reader, bipolar montage, SOZ labels, artifact rule, AUC and sign-flip code. We added multi-channel spike events and leader features.