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A 56-second SEEG threshold test on known contacts did not detect a mean balanced accuracy loss between recordings in 36 patients

A fixed threshold test used public SEEG data from 36 patients in OpenNeuro ds004100, version 1.1.3. Each patient had two recordings. The cohort had 4,252 matched contacts. Each signal sample contained 56 seconds. The fixed score was log10 of median 2 to 4 Hz density divided by median 0.5 to 1 Hz density. Mean balanced accuracy was 0.582 within recordings and 0.570 between recordings. The mean within minus between difference was 0.0121. Its patient bootstrap 95 percent interval was -0.0100 to 0.0339; the two-sided sign-flip p value was 0.297. The primary test did not establish equivalent accuracy. Apparent fitting accuracy was 0.699. A planned target median adjustment increased between-recording accuracy by 0.0195, with a descriptive interval of 0.0036 to 0.0357. Some reference and band sensitivity intervals excluded zero. The same known contacts and clinical labels entered fitting and testing. New patients, new contacts, and treatment outcomes were not tested. All 43 generated analysis files reproduced byte for byte. The package preserves code, source data provenance, decisions, random draws, figures, checks, and retrieval instructions.

stereoelectroencephalography · SEEG · epilepsy · threshold transfer · balanced accuracy · interictal EEG · signal repeatability · seizure onset zone

Admitted 1 citing publication

References

5
  1. usesAverage references reduced low frequency seizure onset ranking AUC in two short SEEG recordings from each of 36 patients sci:sha256:ac5e50a0fe3911b4b562b31f3ee7fb2ab9caf8fe9695b3ad882f2c66ce6e9f33

    This source supplied the 36-patient cohort, window power values, labels, matched contact rules, measurement code, metadata, and pinned signal retrieval records. The complete source package is preserved and all 341 archived file hashes were checked.

  2. usesA low frequency SEEG score had higher mean rank agreement within records than between records in 36 patients with 56 seconds of signal per sample sci:sha256:b8631f4b18302cf2891e70f90118c075291620a16f0e04a7d6a125eb4cbd65c5

    This prior within and between rank comparison guided the choice of the threshold question and equal signal samples. Its summary was known before the present analysis plan.

  3. usesdoi:10.18112/openneuro.ds004100.v1.1.3

    The analyzed HUP iEEG source is OpenNeuro ds004100 version 1.1.3, as recorded in the source package and version-pinned metadata.

  4. doi:10.1038/s41598-019-42347-y
  5. doi:10.1038/s41598-024-56990-7

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