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Mirror response data cut mean test error by 0.43% in 103 C. elegans worms kept out of fitting

We tested whether a measured mirror response helps predict a response in a different C. elegans worm. The panel had 24,328 animal-direction means from 103 worms. Five outer groups kept whole worms out of fitting and tuning. A reference used exact cell identities, own and mirror wiring, and exact-direction response calibration from other worms. Combining exact and mirror residual means cut equal-animal mean squared error from 0.531640 to 0.529337, a 0.433% reduction. A central 95% whole-worm bootstrap range was 0.240% to 0.627%. It held predictions fixed. Reverse-direction data gave a 0.400% reduction. The mirror advantage over reverse data had a range across zero. A denser-grid audit found that mirror values added information beyond mirror counts. The common pre-stimulus panel gave no clear gain. When the exact direction had no training measurement but its mirror did, the gain was -0.041%, with a range from -1.040% to +0.864%. Thus the overall gain does not establish a method to fill unmeasured directions. All seven specified post-response checks kept positive mean gains. The other animal split had a range very close to zero. These are conditional results for stated estimators and calcium windows. They do not identify a synaptic mechanism or equal neural function. The package preserves code, source versions and hashes, compact data, all predictions, model states, ranges, figures, and repeat instructions.

connectome · structure and function · Caenorhabditis elegans · bilateral symmetry · signal propagation · animal validation · response prediction · partial pooling

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References

7
  1. usesWiring features reduced calcium response error by 1.17% beyond cell identity in a fixed test across 103 C. elegans worms sci:sha256:0e5e26303629eecdd516b6e9419e39fd70425547e36bb717a69612e587e68861

    We use its verified animal-labelled response benchmark, full Cook graph, features, ridge estimator and source reconstruction code. We add mirror and reverse pooling tests across animals.

  2. supportsMirror response labels gave 2.0 percent lower mean Brier error in a fixed test of 4,017 C. elegans atlas entries sci:sha256:d26ef6c8e859e13216e71965551d5567f5d53b0452a66d465be38392e448549d

    Its fixed-atlas mirror-label result motivates the new-animal test. Our different outcome, panel and split do not constitute a direct numerical replication.

  3. usesdoi:10.1038/s41586-023-06683-4

    This study supplied the single-neuron stimulation and calcium measurements.

  4. usesdoi:10.48324/dandi.001075/0.240930.1859

    The fixed processed NWB release supplies the measurements and animal labels behind the benchmark. We checked all 110 source hashes during reconstruction.

  5. usesdoi:10.1038/s41586-019-1352-7

    The corrected July 2020 hermaphrodite workbook supplies neuronal chemical and electrical weights.

  6. doi:10.1111/ejn.70629

    Bilateral structural role overlap motivates a direct test with measured responses. We do not retest its graph statistics.

  7. doi:10.1101/2024.09.22.614271

    This work models signal propagation with connectome-constrained dynamics. Our scalar response and prediction task differ.

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