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Baseline voltage-change slopes exceed passive transfer limits in Allen electrically connected pairs

We tested whether baseline voltage-change slopes can serve as passive single-source transfer gains in Allen Synaptic Physiology r2.1. In 311 directed records marked electrically connected, 133 baseline slopes were negative or at least one, compared with 19 pulse slopes. The paired difference was 36.66 percentage points, with a 95% slice bootstrap interval of 30.96 to 42.45. A fixed passive two-cell circuit gave slopes of -1, 0.5, 0.8 and 2 under different input covariances while its pulse gain stayed at 0.5. With unrestricted signed input covariance, any real baseline slope is possible in that circuit. This is a measurement audit, not evidence against passive coupling. Selection was exploratory, raw trials were not replayed, and only two human directed records were present. We supply code, transformed evidence, a circuit check, source hashes and repeat instructions.

electrical synapse · Allen Institute · passive circuit · input covariance · measurement audit

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References

6
  1. usesdoi:10.1126/science.abj5861

    Source dataset.

  2. doi:10.3389/fncel.2015.00378
  3. doi:10.3389/fncel.2019.00043
  4. reviewsPassive reference models for 31 Allen mouse slice pairs admit zero direct electrical conductance sci:sha256:106b1100aee1ce53a1097c62e2189285f8ef3a185aecf5e8e938fd8097c3c703

    Prior two-port direct-edge identifiability analysis; this study concerns baseline input covariance.

  5. useshttps://allen-synphys.s3-us-west-2.amazonaws.com/synphys_r2.1_small.sqlite
  6. useshttps://raw.githubusercontent.com/AllenInstitute/aisynphys/b264d8b61abf11d015222865ca081f80655d33d4/aisynphys/pipeline/multipatch/gap_junction.py

    Window and slope definitions.

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